6BVE	Isomerase	date	Dec 12, 2017
title	Triosephosphate Isomerase Of Synechocystis In Complex With 2 Phosphoglycolic Acid
authors	P.Jimenez-Sandoval, E.Castro-Torres, L.G.Brieba
compound		source
Molecule: Triosephosphate Isomerase Chain: A, B Synonym: Tpi,Triose-Phosphate Isomerase Ec: 5.3.1.1 Engineered: Yes		Organism_scientific: Synechocystis Sp. (Strain Pcc 6803 K Organism_taxid: 1111708 Strain: Pcc 6803 Kazusa Gene: Tpia, Tpi, Slr0783 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.154 R_Free 0.190
crystal cell	length a length b length c angle alpha angle beta angle gamma 72.880 73.099 85.175 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.78 Å
ligand	NA, PGA	enzyme	Isomerase E.C.5.3.1.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural Basis for the Limited Response to Oxidative and Thiol-Conjugating Agents by Triosephosphate Isomerase From the Photosynthetic Bacteria Synechocystis., Castro-Torres E, Jimenez-Sandoval P, Fernandez-de Gortari E, Lopez-Castillo M, Baruch-Torres N, Lopez-Hidalgo M, Peralta-Castro A, Diaz-Quezada C, Sotelo-Mundo RR, Benitez-Cardoza CG, Espinoza-Fonseca LM, Ochoa-Leyva A, Brieba LG, Front Mol Biosci. 2018 Nov 27;5:103. doi: 10.3389/fmolb.2018.00103. eCollection, 2018. PMID:30538993

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk] Biological Unit Coordinates (6bve.pdb1.gz) 83 Kb LPC: Ligand-Protein Contacts for 6BVE CSU: Contacts of Structural Units for 6BVE Structure Factors (384 Kb) Retrieve 6BVE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6BVE from S2C, [Save to disk]

View 6BVE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6BVE

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6bve_A] [6bve_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6BVE

Community annotation for 6BVE at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---