6BWK Transferase date Dec 15, 2017
title Crystal Structure Of The Human Mlkl Pseudokinase Domain T357 Mutant
authors A.D.Cowan, P.E.Czabotar, J.M.Murphy
compound source
Molecule: Mixed Lineage Kinase Domain-Like Protein
Chain: A
Fragment: Unp Residues 190-471
Synonym: Hmlkl
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mlkl
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.255 R_Free 0.297
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.114 74.723 127.601 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.79 Å
ligand GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceConformational switching of the pseudokinase domain promotes human MLKL tetramerization and cell death by necroptosis., Petrie EJ, Sandow JJ, Jacobsen AV, Smith BJ, Griffin MDW, Lucet IS, Dai W, Young SN, Tanzer MC, Wardak A, Liang LY, Cowan AD, Hildebrand JM, Kersten WJA, Lessene G, Silke J, Czabotar PE, Webb AI, Murphy JM, Nat Commun. 2018 Jun 21;9(1):2422. doi: 10.1038/s41467-018-04714-7. PMID:29930286
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (6bwk.pdb1.gz) 85 Kb
  • LPC: Ligand-Protein Contacts for 6BWK
  • CSU: Contacts of Structural Units for 6BWK
  • Structure Factors (366 Kb)
  • Retrieve 6BWK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BWK from S2C, [Save to disk]
  • View 6BWK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6BWK
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6bwk from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6bwk_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6BWK
  • Community annotation for 6BWK at PDBWiki (http://pdbwiki.org)

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