6BYK	Signaling Protein	date	Dec 20, 2017
title	Structure Of 14-3-3 Betaalpha Bound To O-Clcnac Peptide
authors	M.A.Schumacher
compound		source
Molecule: 14-3-3 Protein Betaalpha Chain: A, B, C, D Synonym: Protein 1054,Protein Kinase C Inhibitor Protein 1, Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ywhab Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Atppvsqasstt O-Glcnac Peptide Chain: G, J, K, R Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 1 21 1	R_factor 0.215 R_Free 0.268
crystal cell	length a length b length c angle alpha angle beta angle gamma 82.670 71.450 95.759 90.00 111.61 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	NAG	enzyme
Gene Ontology	Chain Function Process Component A, D, C, B protein kinase inhibitor act... positive regulation of prote...
Primary reference	Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins., Toleman CA, Schumacher MA, Yu SH, Zeng W, Cox NJ, Smith TJ, Soderblom EJ, Wands AM, Kohler JJ, Boyce M, Proc Natl Acad Sci U S A. 2018 May 21. pii: 1722437115. doi:, 10.1073/pnas.1722437115. PMID:29784830

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (447 Kb) [Save to disk] Biological Unit Coordinates (6byk.pdb1.gz) 111 Kb Biological Unit Coordinates (6byk.pdb2.gz) 113 Kb Biological Unit Coordinates (6byk.pdb3.gz) 112 Kb Biological Unit Coordinates (6byk.pdb4.gz) 112 Kb LPC: Ligand-Protein Contacts for 6BYK CSU: Contacts of Structural Units for 6BYK Structure Factors (532 Kb) Retrieve 6BYK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6BYK from S2C, [Save to disk]

View 6BYK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6BYK

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6byk_J] [6byk_C] [6byk_D] [6byk_A] [6byk_K] [6byk_G] [6byk_B] [6byk_R] SWISS-PROT database: Domain organization of by SWISSPFAM

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