6BZE Signaling Protein date Dec 23, 2017
title Cryo-Em Structure Of Bcl10 Card Filament
authors L.David, Y.Li, J.Ma, E.Garner, X.Zhang, H.Wu
compound source
Molecule: B-Cell Lymphomaleukemia 10
Chain: A, B, C, D, E, F, G, H
Synonym: B-Cell Clllymphoma 10,Bcl-10,Card-Containing Mole Enhancing Nf-Kappa-B,Card-Like Apoptotic Protein,Hclap,Ced- Prodomain Homologous E10-Like Regulator,Ciper,Cellular Homo Vcarmen,Ccarmen,Cellular-E10,C-E10,Mammalian Card-Containin Molecule E10,Me10;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bcl10, Ciper, Clap
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.00 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceAssembly mechanism of the CARMA1-BCL10-MALT1-TRAF6 signalosome., David L, Li Y, Ma J, Garner E, Zhang X, Wu H, Proc Natl Acad Sci U S A. 2018 Jan 30. pii: 1721967115. doi:, 10.1073/pnas.1721967115. PMID:29382759
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (323 Kb) [Save to disk]
  • Biological Unit Coordinates (6bze.pdb1.gz) 320 Kb
  • CSU: Contacts of Structural Units for 6BZE
  • Retrieve 6BZE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BZE from S2C, [Save to disk]
  • View 6BZE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6BZE
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6bze from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6bze_H] [6bze_E] [6bze_A] [6bze_B] [6bze_F] [6bze_D] [6bze_C] [6bze_G]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6BZE
  • Community annotation for 6BZE at PDBWiki (http://pdbwiki.org)

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