6C1Y	Dna Binding Protein Dna	date	Jan 05, 2018
title	Mbd Of Human Mecp2 In Complex With Methylated Dna
authors	K.Liu, C.Bian, W.Tempel, A.K.Wernimont, C.H.Arrowsmith, C.Bountra A.M.Edwards, J.Min, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Methyl-Cpg-Binding Protein 2 Chain: A, B Synonym: Mecp2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mecp2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)-V2r-Prare2 Expression_system_plasmid: Pet28-Mhl
Molecule: 12-Mer Dna Chain: D, C, F, E Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 Other_details: Synthetic Dna
symmetry	Space Group: P 1	R_factor 0.231 R_Free 0.286
crystal cell	length a length b length c angle alpha angle beta angle gamma 40.753 47.359 54.623 68.15 89.83 65.98
method	X-Ray Diffraction	resolution	2.30 Å
ligand	5CM, UNX	enzyme
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk] Biological Unit Coordinates (6c1y.pdb1.gz) 43 Kb Biological Unit Coordinates (6c1y.pdb2.gz) 43 Kb LPC: Ligand-Protein Contacts for 6C1Y CSU: Contacts of Structural Units for 6C1Y Structure Factors (871 Kb) Retrieve 6C1Y in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6C1Y from S2C, [Save to disk]

View 6C1Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6C1Y

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6c1y_A] [6c1y_B] [6c1y_C] [6c1y_D] [6c1y_E] [6c1y_F] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 6C1Y at PDBWiki (http://pdbwiki.org)

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