6C31	Dna Binding Protein Dna	date	Jan 09, 2018
title	Crystal Structure Of Tetr Family Protein Rv0078 In Complex W
authors	H.C.Hsu, H.Li
compound		source
Molecule: Tetr Family Transcriptional Regulator Chain: A, B, C, D, E, F, G, H Synonym: Rv0078 Engineered: Yes		Organism_scientific: Mycobacterium Tuberculosis (Strain Atc H37rv); Organism_taxid: 83332 Strain: Atcc 25618 H37rv Gene: Lh57_00450 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008
Molecule: Dna (5'- D(Papcpapapgpcpapgpapcptpgpcpcpgpgptpapa Chain: I, K Engineered: Yes		Synthetic: Yes Organism_scientific: Mycobacterium Tuberculosis H37rv Organism_taxid: 83332
Molecule: Dna (5'- D(Gptptpapcpcpgpgpcpapgptpcptpgpcptptpgp A)-3'); Chain: J, L Engineered: Yes		Synthetic: Yes Organism_scientific: Mycobacterium Tuberculosis H37rv Organism_taxid: 83332
symmetry	Space Group: P 1 21 1	R_factor 0.202 R_Free 0.247
crystal cell	length a length b length c angle alpha angle beta angle gamma 82.039 80.040 186.660 90.00 90.07 90.00
method	X-Ray Diffraction	resolution	3.00 Å
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G
Primary reference	Cytokinin Signaling in Mycobacterium tuberculosis., Samanovic MI, Hsu HC, Jones MB, Jones V, McNeil MR, Becker SH, Jordan AT, Strnad M, Xu C, Jackson M, Li H, Darwin KH, MBio. 2018 Jun 19;9(3). pii: mBio.00989-18. doi: 10.1128/mBio.00989-18. PMID:29921668

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (275 Kb) [Save to disk] Biological Unit Coordinates (6c31.pdb1.gz) 136 Kb Biological Unit Coordinates (6c31.pdb2.gz) 136 Kb CSU: Contacts of Structural Units for 6C31 Structure Factors (1302 Kb) Retrieve 6C31 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6C31 from S2C, [Save to disk]

View 6C31 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6C31

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6c31_L] [6c31_D] [6c31_E] [6c31_I] [6c31_B] [6c31_F] [6c31_H] [6c31_G] [6c31_K] [6c31_A] [6c31_J] [6c31_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6C31

Community annotation for 6C31 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---