6C48 Cell Cycle Dna Binding date Jan 11, 2018
title Crystal Structure Of B-Myb-Lin9-Lin52 Complex
authors K.Z.Guiley, S.M.Tripathi, S.M.Rubin
compound source
Molecule: Protein Lin-9 Homolog
Chain: A, D
Synonym: Hlin-9,Beta Subunit-Associated Regulator Of Apopto Gene Similar Protein,Type I Interferon Receptor Beta Chain- Protein,Prb-Associated Protein;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Lin9, Bara, Tgs
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Myb-Related Protein B
Chain: F, C
Synonym: B-Myb,Myb-Like Protein 2
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mybl2, Bmyb
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Protein Lin-52 Homolog
Chain: B, E
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Lin52, C14orf46
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.217 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.760 30.770 105.350 90.00 99.89 90.00
method X-Ray Diffractionresolution 2.32 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D


E, B


Primary referenceStructural mechanism of Myb-MuvB assembly., Guiley KZ, Iness AN, Saini S, Tripathi S, Lipsick JS, Litovchick L, Rubin SM, Proc Natl Acad Sci U S A. 2018 Sep 17. pii: 1808136115. doi:, 10.1073/pnas.1808136115. PMID:30224471
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (6c48.pdb1.gz) 29 Kb
  • Biological Unit Coordinates (6c48.pdb2.gz) 30 Kb
  • CSU: Contacts of Structural Units for 6C48
  • Structure Factors (182 Kb)
  • Retrieve 6C48 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6C48 from S2C, [Save to disk]
  • View 6C48 in 3D
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  • Visual 3D analysis of 6C48
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6c48 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6c48_B] [6c48_D] [6c48_F] [6c48_A] [6c48_E] [6c48_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6C48
  • Community annotation for 6C48 at PDBWiki (http://pdbwiki.org)

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