6C6R Oxidoreductase Oxidoreductase Inhibitor date Jan 19, 2018
title Human Squalene Epoxidase (Sqle, Squalene Monooxygenase) Stru Fad
authors A.K.Padyana, L.Jin
compound source
Molecule: Squalene Monooxygenase
Chain: A, B
Fragment: Residues 118-574
Synonym: Squalene Epoxidase,Se
Ec: 1.14.14.17
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sqle, Erg1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 32 2 1
R_factor 0.190 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
126.390 126.390 166.010 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.00 Å
ligand CPS, FAD, PEG enzyme Oxidoreductase E.C.1.14.14.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk]
  • Biological Unit Coordinates (6c6r.pdb1.gz) 150 Kb
  • LPC: Ligand-Protein Contacts for 6C6R
  • CSU: Contacts of Structural Units for 6C6R
  • Structure Factors (690 Kb)
  • Retrieve 6C6R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6C6R from S2C, [Save to disk]
    • View 6C6R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6C6R
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6c6r_B] [6c6r_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6C6R
  • Community annotation for 6C6R at PDBWiki (http://pdbwiki.org)

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