6CCJ Viral Protein date Feb 07, 2018
title Nmr Structure Of The Rous Sarcoma Virus Matrix Protein (M Do
authors J.Vlach, J.Saad
compound source
Molecule: Virus Matrix Protein
Chain: A
Ec: 2.7.7.-,3.1.-.-
Engineered: Yes
Mutation: Yes
Other_details: M Domain
Organism_scientific: Rous Sarcoma Virus (Strain Prague C)
Organism_common: Rsv-Prc
Organism_taxid: 11888
Strain: Prague C
Gene: Gag-Pol
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.7 BRENDA
Primary referenceStructural basis for targeting avian sarcoma virus Gag polyprotein to the plasma membrane for virus assembly., Vlach J, Eastep GN, Ghanam RH, Watanabe SM, Carter C, Saad JS, J Biol Chem. 2018 Oct 11. pii: RA118.003944. doi: 10.1074/jbc.RA118.003944. PMID:30309983
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (429 Kb) [Save to disk]
  • Biological Unit Coordinates (6ccj.pdb1.gz) 22 Kb
  • CSU: Contacts of Structural Units for 6CCJ
  • Original NMR restraints for 6CCJ from PDB
  • Retrieve 6CCJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CCJ from S2C, [Save to disk]
  • View 6CCJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6CCJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ccj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6CCJ
  • Community annotation for 6CCJ at PDBWiki (http://pdbwiki.org)

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