6CD9	Peptide Binding Protein	date	Feb 08, 2018
title	Gid4 In Complex With A Peptide
authors	C.Dong, W.Tempel, C.Bountra, C.H.Arrowsmith, A.M.Edwards, J.Min, S Genomics Consortium (Sgc)
compound		source
Molecule: Glucose-Induced Degradation Protein 4 Homolog Chain: A Fragment: Residues 124-289 Synonym: Vacuolar Import And Degradation Protein 24 Homolog Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gid4, C17orf39, Vid24 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28-Mhl
Molecule: Tetrapeptide Psrw Chain: B Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 Other_details: Synthetic Peptide
symmetry	Space Group: P 21 21 21	R_factor 0.174 R_Free 0.193
crystal cell	length a length b length c angle alpha angle beta angle gamma 38.270 40.022 110.727 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.55 Å
ligand	UNX	enzyme
Primary reference	Molecular basis of GID4-mediated recognition of degrons for the Pro/N-end rule pathway., Dong C, Zhang H, Li L, Tempel W, Loppnau P, Min J, Nat Chem Biol. 2018 May;14(5):466-473. doi: 10.1038/s41589-018-0036-1. Epub 2018 , Apr 9. PMID:29632410

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk] Biological Unit Coordinates (6cd9.pdb1.gz) 32 Kb LPC: Ligand-Protein Contacts for 6CD9 CSU: Contacts of Structural Units for 6CD9 Structure Factors (2996 Kb) Retrieve 6CD9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6CD9 from S2C, [Save to disk]

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Structure-derived information

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Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6cd9_B] [6cd9_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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