6CDR Transcription date Feb 09, 2018
title Human Ctbp1 (28-378)
authors W.E.Royer, A.G.Bellesis
compound source
Molecule: C-Terminal-Binding Protein 1
Chain: A
Fragment: Unp Residues 28-379
Synonym: Ctbp1
Ec: 1.1.1.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ctbp1, Ctbp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 64 2 2
R_factor 0.235 R_Free 0.262
length a length b length c angle alpha angle beta angle gamma
89.218 89.218 164.233 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.40 Å
enzyme Oxidoreductase E.C.1.1.1 BRENDA

Primary referenceAssembly of human C-terminal Binding Protein (CtBP) into tetramers., Bellesis AG, Jecrois AM, Hayes JA, Schiffer C, Royer WE Jr., J Biol Chem. 2018 Apr 26. pii: RA118.002514. doi: 10.1074/jbc.RA118.002514. PMID:29700119
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk]
  • Biological Unit Coordinates (6cdr.pdb1.gz) 419 Kb
  • Biological Unit Coordinates (6cdr.pdb2.gz) 211 Kb
  • CSU: Contacts of Structural Units for 6CDR
  • Structure Factors (410 Kb)
  • Retrieve 6CDR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CDR from S2C, [Save to disk]
  • View 6CDR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6CDR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6cdr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6cdr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6CDR
  • Community annotation for 6CDR at PDBWiki (http://pdbwiki.org)

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