6CEU	Transcription Dna	date	Feb 12, 2018
title	Mbd3 Mbd In Complex With Methylated, Non-Palindromic Cpg Dna Alternative Interpretation Of Crystallographic Data
authors	K.Liu, W.Tempel, A.K.Wernimont, C.Bountra, C.H.Arrowsmith, A.M.Ed J.Min, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Methyl-Cpg-Binding Domain Protein 3 Chain: A, B Synonym: Methyl-Cpg-Binding Protein Mbd3 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mbd3 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21-V2r-Prare2 Expression_system_plasmid: Pet28-Gstlic
Molecule: Dna (5'-D(Gpcpcpapgp(5cm)Pgptptpgpgpc Chain: C, E Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Dna (5'-D(Gpcpcpapap(5cm)Pgpcptpgpgpc Chain: D, F Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: C 1 2 1	R_factor 0.215 R_Free 0.252
crystal cell	length a length b length c angle alpha angle beta angle gamma 72.174 36.223 131.157 90.00 92.85 90.00
method	X-Ray Diffraction	resolution	2.01 Å
ligand	5CM, UNX	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural analyses reveal that MBD3 is a methylated CG binder., Liu K, Lei M, Wu Z, Gan B, Cheng H, Li Y, Min J, FEBS J. 2019 Apr 13. doi: 10.1111/febs.14850. PMID:30980593

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk] Biological Unit Coordinates (6ceu.pdb1.gz) 44 Kb Biological Unit Coordinates (6ceu.pdb2.gz) 44 Kb LPC: Ligand-Protein Contacts for 6CEU CSU: Contacts of Structural Units for 6CEU Structure Factors (1944 Kb) Retrieve 6CEU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6CEU from S2C, [Save to disk]

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Visual 3D analysis of 6CEU

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6ceu_B] [6ceu_E] [6ceu_A] [6ceu_D] [6ceu_F] [6ceu_C] SWISS-PROT database: Domain organization of by SWISSPFAM

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