6CHV Antitoxin Dna date Feb 23, 2018
title Proteus Vulgaris Higa Antitoxin Bound To Dna
authors M.A.Schureck, E.D.Hoffer, N.Onuoha, C.M.Dunham
compound source
Molecule: Antitoxin Higa
Chain: A, C, B, D, G, H
Synonym: Antidote Protein,Host Inhibition Of Growth Protein
Engineered: Yes
Organism_scientific: Proteus Vulgaris
Organism_taxid: 585
Gene: Higa
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Phigcryst3
Chain: I, E, K
Engineered: Yes

Synthetic: Yes
Organism_scientific: Proteus Vulgaris
Organism_taxid: 585

Molecule: Phigcryst4
Chain: J, F, L
Engineered: Yes

Synthetic: Yes
Organism_scientific: Proteus Vulgaris
Organism_taxid: 585
symmetry Space Group: P 65
R_factor 0.225 R_Free 0.260
crystal
cell
length a length b length c angle alpha angle beta angle gamma
79.449 79.449 399.427 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.90 Å
ligand MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
H, A, D, C, G, B
  • transcription regulatory reg...


  • Primary referenceStructural basis of transcriptional regulation by the HigA antitoxin., Schureck MA, Meisner J, Hoffer ED, Wang D, Onuoha N, Ei Cho S, Lollar P 3rd, Dunham CM, Mol Microbiol. 2019 Feb 21. doi: 10.1111/mmi.14229. PMID:30793388
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (303 Kb) [Save to disk]
  • Biological Unit Coordinates (6chv.pdb1.gz) 97 Kb
  • Biological Unit Coordinates (6chv.pdb2.gz) 98 Kb
  • Biological Unit Coordinates (6chv.pdb3.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 6CHV
  • CSU: Contacts of Structural Units for 6CHV
  • Structure Factors (1093 Kb)
  • Retrieve 6CHV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CHV from S2C, [Save to disk]
  • View 6CHV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6CHV
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6chv from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6chv_J] [6chv_L] [6chv_F] [6chv_H] [6chv_B] [6chv_K] [6chv_D] [6chv_I] [6chv_A] [6chv_C] [6chv_G] [6chv_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6CHV
  • Community annotation for 6CHV at PDBWiki (http://pdbwiki.org)

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