6CHZ Nuclear Protein Antagonist date Feb 23, 2018
title Estrogen Receptor Alpha Y537s Bound To Antagonist H3b-9224.
authors N.A.Larsen
compound source
Molecule: Estrogen Receptor
Chain: A
Synonym: Er,Er-Alpha,Estradiol Receptor,Nuclear Receptor Su Group A Member 1;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Esr1, Esr, Nr3a1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 65 2 2
R_factor 0.212 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.608 58.608 276.303 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.68 Å
ligand EDO, F3D enzyme
Primary referenceDiscovery of Selective Estrogen Receptor Covalent Antagonists (SERCAs) for the treatment of ERa(WT) and ERa(MUT) breast cancer., Puyang X, Furman C, Zheng GZ, Wu ZJ, Banka D, Aithal B K, Agoulnik S, Bolduc DM, Buonamici S, Caleb B, Das S, Eckley S, Fekkes P, Hao MH, Hart A, Houtman R, Irwin S, Joshi JJ, Karr C, Kim A, Kumar N, Kumar P, Kuznetsov G, Lai WG, Larsen N, MacKenzie C, Martin LA, Melchers D, Moriarty A, Nguyen TV, Norris J, O'Shea M, Pancholi S, Prajapati S, Rajagopalan S, Reynolds DJ, Rimkunas V, Rioux N, Ribas R, Siu A, Sivakumar S, Subramanian V, Thomas M, Vaillancourt FH, Wang J, Wardell S, Wick MJ, Yao S, Yu L, Warmuth M, Smith PG, Zhu P, Korpal M, Cancer Discov. 2018 Jul 10. pii: 2159-8290.CD-17-1229. doi:, 10.1158/2159-8290.CD-17-1229. PMID:29991605
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (6chz.pdb1.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 6CHZ
  • CSU: Contacts of Structural Units for 6CHZ
  • Structure Factors (889 Kb)
  • Retrieve 6CHZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CHZ from S2C, [Save to disk]
  • View 6CHZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6CHZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6chz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6CHZ
  • Community annotation for 6CHZ at PDBWiki (http://pdbwiki.org)

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