6CIM | Recombination Dna | date | Feb 24, 2018 |
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title | Pre-Reaction Complex, Rag1(E962q)2-Nickedintact 1223rss C Mn2+ | ||||||||||||||||||
authors | W.Chuenchor, X.Chen, M.S.Kim, M.Gellert, W.Yang | ||||||||||||||||||
compound | source | ||||||||||||||||||
Molecule: V(D)J Recombination-Activating Protein 1 Chain: A, C Synonym: Rag-1 Ec: 3.1.-.-,2.3.2.27 Engineered: Yes Mutation: Yes |
Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Rag1 Expression_system: Homo Sapiens Expression_system_taxid: 9606 Expression_system_cell_line: Hek293t Expression_system_plasmid: Plexm | ||||||||||||||||||
Molecule: V(D)J Recombination-Activating Protein 2 Chain: B, D Synonym: Rag-2 Engineered: Yes |
Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Rag2, Rag-2 Expression_system: Homo Sapiens Expression_system_taxid: 9606 Expression_system_cell_line: Hek293t Expression_system_plasmid: Plexm | ||||||||||||||||||
Molecule: High Mobility Group Protein B1 Chain: N Synonym: High Mobility Group Protein 1,Hmg-1 Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Cell_line: H Gene: Hmgb1, Hmg1 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) | ||||||||||||||||||
Molecule: Nicked 12rss Intermediate Reverse Strand Chain: F Engineered: Yes |
Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606 | ||||||||||||||||||
Molecule: Dna (5'-D(Gpcpcptpgptpcptptpa)-3') Chain: I Engineered: Yes |
Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606 | ||||||||||||||||||
Molecule: Nicked 12rss Intermediate Forward Strand Chain: L Engineered: Yes |
Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606 | ||||||||||||||||||
Molecule: Intact 23rss Substrate Reverse Strand Chain: G Engineered: Yes |
Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606 | ||||||||||||||||||
Molecule: Intact 23rss Substrate Forward Strand Chain: J Engineered: Yes |
Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606 | ||||||||||||||||||
symmetry | Space Group: C 1 2 1 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 3.60 Å | ||||||||||||||||
ligand | MN, ZN | enzyme | Hydrolase E.C.3.1 BRENDA | ||||||||||||||||
Gene Ontology |
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Primary reference | Cracking the DNA Code for V(D)J Recombination., Kim MS, Chuenchor W, Chen X, Cui Y, Zhang X, Zhou ZH, Gellert M, Yang W, Mol Cell. 2018 Apr 19;70(2):358-370.e4. doi: 10.1016/j.molcel.2018.03.008. Epub, 2018 Apr 5. PMID:29628308 |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |