6CIV Biosynthetic Protein date Feb 25, 2018
title Lactam Cyclised Mimetic Of A Fragment Of P21
authors K.L.Wegener
compound source
Molecule: P21
Chain: C
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
ligand DAB enzyme
Primary referenceRational design of a 310-helical PIP-box mimetic targeting PCNA - the human sliding clamp., Wegener KL, McGrath AE, Dixon NE, Oakley AJ, Scanlon DB, Abell AD, Bruning J, Chemistry. 2018 Jun 19. doi: 10.1002/chem.201801734. PMID:29917264
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (6civ.pdb1.gz) 5 Kb
  • LPC: Ligand-Protein Contacts for 6CIV
  • CSU: Contacts of Structural Units for 6CIV
  • Original NMR restraints for 6CIV from PDB
  • Retrieve 6CIV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CIV from S2C, [Save to disk]
    • View 6CIV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6CIV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6civ_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6CIV
  • Community annotation for 6CIV at PDBWiki (http://pdbwiki.org)

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