6CJZ Protein Fibril date Feb 27, 2018
title Solution Structure Of Amebosin
authors A.Mendoza, D.Flores-Solis, F.Del Rio Portilla, L.Brieba De Cast
compound source
Molecule: Amoebiasin-1
Chain: A
Synonym: Cysteine Protease Inhibitor 1,Ehicp1,Icp-1
Engineered: Yes
Mutation: Yes
 Organism_scientific: Entamoeba Histolytica
Organism_taxid: 5759
Gene: Ams, Icp1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • cysteine-type endopeptidase ...


    • Primary referenceSolution structure of the inhibitor of cysteine proteases 1 from Entamoeba histolytica reveals a possible auto regulatory mechanism., Flores-Solis D, Mendoza A, Renteria-Gonzalez I, Casados-Vazquez LE, Trasvina-Arenas CH, Jimenez-Sandoval P, Benitez-Cardoza CG, Del Rio-Portilla F, Brieba LG, Biochim Biophys Acta Proteins Proteom. 2020 Jul 28;1868(11):140512. doi:, 10.1016/j.bbapap.2020.140512. PMID:32731033
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (263 Kb) [Save to disk]
  • Biological Unit Coordinates (6cjz.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 6CJZ
  • Original NMR restraints for 6CJZ from PDB
  • Retrieve 6CJZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CJZ from S2C, [Save to disk]
    • View 6CJZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6CJZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6cjz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6CJZ
  • Community annotation for 6CJZ at PDBWiki (http://pdbwiki.org)

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