6CLC Protein Fibril date Mar 02, 2018
title 1.01 A Microed Structure Of Gsnqnnf At 0.27 E- A^2
authors J.Hattne, D.Shi, C.Glynn, C.T.Zee, M.Gallagher-Jones, M.W.Martyn J.A.Rodriguez, T.Gonen
compound source
Molecule: Gsnqnnf
Chain: A
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: P 1
R_factor 0.178 R_Free 0.159
crystal
cell
length a length b length c angle alpha angle beta angle gamma
4.850 14.150 17.530 83.57 85.90 82.80
method Electron Crystallographyresolution 1.01 Å
ligand ACT, ZN enzyme
Primary referenceAnalysis of Global and Site-Specific Radiation Damage in Cryo-EM., Hattne J, Shi D, Glynn C, Zee CT, Gallagher-Jones M, Martynowycz MW, Rodriguez JA, Gonen T, Structure. 2018 May 1;26(5):759-766.e4. doi: 10.1016/j.str.2018.03.021. Epub 2018, Apr 26. PMID:29706530
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (5 Kb) [Save to disk]
  • Biological Unit Coordinates (6clc.pdb1.gz) 2 Kb
  • LPC: Ligand-Protein Contacts for 6CLC
  • CSU: Contacts of Structural Units for 6CLC
  • Structure Factors (27 Kb)
  • Retrieve 6CLC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CLC from S2C, [Save to disk]
    • View 6CLC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6CLC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6clc_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6CLC
  • Community annotation for 6CLC at PDBWiki (http://pdbwiki.org)

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