6CNC | Transcription Dna | date | Mar 08, 2018 |
||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
title | Yeast Rna Polymerase III Open Complex | ||||||||||||||
authors | Y.Han, Y.He | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase III Subunit Rpc1 Chain: A Synonym: Rna Polymerase III Subunit C1,Dna-Directed Rna Pol III Largest Subunit,Rna Polymerase III Subunit C160; Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase III Subunit Rpc2 Chain: B Synonym: Rna Polymerase III Subunit C2,C128,Dna-Directed Rn Polymerase III 130 Kda Polypeptide; Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I And III Subunit Rp Chain: C Synonym: Rna Polymerases I And III Subunit Ac1,C37,Dna-Dire Polymerases I And III 40 Kda Polypeptide,C40; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase III Subunit Rpc9 Chain: D Synonym: Rna Polymerase III Subunit C9,Rna Polymerase III S C17; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: E Synonym: Rna Polymerases I,II,And III Subunit Abc1,Abc27,Dn Rna Polymerases I,And III 27 Kda Polypeptide; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: F Synonym: Rna Polymerases I,II,And III Subunit Abc2,Abc23,Dn Rna Polymerases I,And III 23 Kda Polypeptide; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase III Subunit Rpc8 Chain: G Synonym: Rna Polymerase III Subunit C8,Dna-Directed Rna Pol III 25 Kda Polypeptide,Rna Polymerase III Subunit C25; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: H Synonym: Rna Polymerases I,II,And III Subunit Abc3,Abc14.4, Dna-Directed Rna Polymerases I,And III 14.5 Kda Polypeptide |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase III Subunit Rpc10 Chain: I Synonym: Rna Polymerase III Subunit C10,Dna-Directed Rna Po III 12.5 Kda Polypeptide,Rna Polymerase III Subunit C11; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: J Synonym: Rna Polymerases I,II,And III Subunit Abc5,Abc10-Be Dna-Directed Rna Polymerases I,And III 8.3 Kda Polypeptide; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I And III Subunit Rp Chain: K Synonym: Rna Polymerases I And III Subunit Ac2,Ac19,Dna-Dir Polymerases I And III 16 Kda Polypeptide,Rpa19; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: L Synonym: Rna Polymerases I,II,And III Subunit Abc4,Abc10-Al |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase III Subunit Rpc5 Chain: M Synonym: Rna Polymerase III Subunit C5,Dna-Directed Rna Pol III 37 Kda Polypeptide,Rna Polymerase III Subunit C37; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase III Subunit Rpc4 Chain: N Synonym: Rna Polymerase III Subunit C4,C53,Dna-Directed Rna Polymerase III 47 Kda Polypeptide; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase III Subunit Rpc3 Chain: O Synonym: Rna Polymerase III Subunit C3,C82,Dna-Directed III Polypeptide,C74; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase III Subunit Rpc6 Chain: P Synonym: Rna Polymerase III Subunit C6,C34,Dna-Directed Rna Polymerase III 36 Kda Polypeptide; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase III Subunit Rpc7,Dna- Rna Polymerase III Subunit Rpc7,Dna-Directed Rna Polymerase Subunit Rpc7,Dna-Directed Rna Polymerase III Subunit Rpc7,D Directed Rna Polymerase III Subunit Rpc7; Chain: Q Synonym: Rna Polymerase III Subunit C7,Dna-Directed Rna Pol III 31 Kda Polypeptide,C31,Rna Polymerase III Subunit C7,Dn Rna Polymerase III 31 Kda Polypeptide,C31,Rna Polymerase II C7,Dna-Directed Rna Polymerase III 31 Kda Polypeptide,C31,R Polymerase III Subunit C7,Dna-Directed Rna Polymerase III 3 Polypeptide,C31; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||
Molecule: Transcription Factor Iiib 70 Kda Subunit,Tata-Box Protein,Transcription Factor Iiib 70 Kda Subunit; Chain: R Synonym: Tfiiib,B-Related Factor 1,Brf-1,Tata Sequence-Bind Protein,Tbp,Tata-Binding Factor,Tata-Box Factor,Transcripti D,Transcription Initiation Factor Tfiid Tbp Subunit,Tfiiib, Factor 1,Brf-1; Engineered: Yes Mutation: Yes |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c Gene: Brf1, Pcf4, Tds4, Ygr246c, Spt15, Btf1, Tbp1, Yer148w Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||
Molecule: Transcription Factor Tfiiib Component B'',Transcr Factor Tfiiib Component B'',Transcription Factor Tfiiib Com B'',Transcription Factor Tfiiib Component B'',Transcription Tfiiib Component B''; Chain: S Synonym: Tfiiib90,Tfiiib90,Tfiiib90,Tfiiib90 Engineered: Yes |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c), Saccharomyces Cerevisiae S288c; Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c Gene: Bdp1, Tfc5, Ynl039w, N2682 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||
Molecule: Dna (71-Mer) Chain: X Engineered: Yes |
Synthetic: Yes Organism_scientific: Saccharomyces Cerevisiae S288c Organism_taxid: 559292 | ||||||||||||||
Molecule: Dna (71-Mer) Chain: Y Engineered: Yes |
Synthetic: Yes Organism_scientific: Saccharomyces Cerevisiae S288c Organism_taxid: 559292 | ||||||||||||||
symmetry | Space Group: P 1 |
| |||||||||||||
crystal cell |
| ||||||||||||||
method | Electron Microscopy | resolution | 4.10 Å | ||||||||||||
ligand | ZN | enzyme | Transferase E.C.2.7.7.6 BRENDA | ||||||||||||
Gene Ontology | |||||||||||||||
Primary reference | Structural visualization of RNA polymerase III transcription machineries., Han Y, Yan C, Fishbain S, Ivanov I, He Y, Cell Discov. 2018 Jul 31;4:40. doi: 10.1038/s41421-018-0044-z. eCollection 2018. PMID:30083386 |
Data retrieval |
View 6CNC in 3D |
Visual 3D analysis of 6CNC |
Structure-derived information |
Sequence-derived information |
Other resources with information on 6CNC |
OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |