6CPJ Protein Binding date Mar 13, 2018
title Solution Structure Of Sh3 Domain From Shank2
authors H.Ishida, H.J.Vogel
compound source
Molecule: Sh3 And Multiple Ankyrin Repeat Domains Protein 2
Chain: A
Synonym: Shank2,Cortactin-Binding Protein 1,Cortbp1,Gkapsa Interacting Protein,Proline-Rich Synapse-Associated Protein Prosap1,Spank-3;
Engineered: Yes
 Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Gene: Shank2, Cortbp1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Primary referenceSolution structures of the SH3 domains from Shank scaffold proteins and their interactions with Cav1.3 calcium channels., Ishida H, Skorobogatov A, Yamniuk AP, Vogel HJ, FEBS Lett. 2018 Jul 29. doi: 10.1002/1873-3468.13209. PMID:30058071
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (388 Kb) [Save to disk]
  • Biological Unit Coordinates (6cpj.pdb1.gz) 16 Kb
  • CSU: Contacts of Structural Units for 6CPJ
  • Original NMR restraints for 6CPJ from PDB
  • Retrieve 6CPJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CPJ from S2C, [Save to disk]
    • View 6CPJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6CPJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6cpj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6CPJ
  • Community annotation for 6CPJ at PDBWiki (http://pdbwiki.org)

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