6CQF Transferase Transferase Inhibitor date Mar 15, 2018
title Crystal Structure Of Hpk1 In Complex An Inhibitor G1858
authors P.Wu, I.Lehoux, K.Mortara, Y.Franke, B.K.Chan, W.Wang
compound source
Molecule: Mitogen-Activated Protein Kinase Kinase Kinase Ki
Chain: A
Synonym: Hkp1, Hematopoietic Progenitor Kinase, Mapkerk Ki Kinase Kinase 1, Mekkk 1;
Ec: 2.7.11.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Map4k1, Hpk1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: C 2 2 21
R_factor 0.208 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.868 98.803 77.100 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.25 Å
ligand F97 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHematopoietic Progenitor Kinase-1 Structure in a Domain-Swapped Dimer., Wu P, Sneeringer CJ, Pitts KE, Day ES, Chan BK, Wei B, Lehoux I, Mortara K, Li H, Wu J, Franke Y, Moffat JG, Grogan JL, Heffron TP, Wang W, Structure. 2018 Nov 13. pii: S0969-2126(18)30386-1. doi:, 10.1016/j.str.2018.10.025. PMID:30503777
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (6cqf.pdb1.gz) 187 Kb
  • LPC: Ligand-Protein Contacts for 6CQF
  • CSU: Contacts of Structural Units for 6CQF
  • Structure Factors (356 Kb)
  • Retrieve 6CQF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CQF from S2C, [Save to disk]
    • View 6CQF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6CQF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6cqf_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6CQF
  • Community annotation for 6CQF at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science