6CTK	Ternary complex crystal structure of DNA polymerase Beta with a dideoxy terminated primer with CHF-R/S isomers, beta, gamma dTTP analogue	date
authors	Batra, V.K., Wilson, S.H.
compound		source
symmetry		R_factor R_Free 0.2440
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.15
ligand	DOC, FDY, MG, NA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Mapping functional substrate-enzyme interactions in the pol beta active site through chemical biology: Structural responses to acidity modification of incoming dNTPs., Batra VK, Oertell K, Beard WA, Kashemirov BA, McKenna CE, Goodman MF, Wilson SH, Biochemistry. 2018 Jun 6. doi: 10.1021/acs.biochem.8b00418. PMID:29874056

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk] Biological Unit Coordinates (6ctk.pdb1.gz) 72 Kb LPC: Ligand-Protein Contacts for 6CTK CSU: Contacts of Structural Units for 6CTK Structure Factors (205 Kb) Retrieve 6CTK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6CTK from S2C, [Save to disk]

View 6CTK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6CTK

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 6ctk from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6ctk_T] [6ctk_D] [6ctk_P] [6ctk_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6CTK

Community annotation for 6CTK at PDBWiki (http://pdbwiki.org)

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