6CUU Transcription Dna Antibiotic date Mar 26, 2018
title Thermus Thermophiles Rna Polymerase In Complex With Promoter Antibiotic Kanglemycin A
authors V.Molodtsov, K.S.Murakami
compound source
Molecule: Dna-Directed Rna Polymerase Subunit Alpha
Chain: A, B
Synonym: Rnap Subunit Alpha,Rna Polymerase Subunit Alpha, Transcriptase Subunit Alpha;
Ec: 2.7.7.6
Engineered: Yes
 Organism_scientific: Thermus Thermophilus (Strain Hb27 At 163 Dsm 7039);
Organism_taxid: 262724
Strain: Hb27 Atcc Baa-163 Dsm 7039
Gene: Rpoa, Tt_c1300
Expression_system: Thermus Thermophilus
Expression_system_taxid: 274

Molecule: Dna-Directed Rna Polymerase Subunit Beta
Chain: C
Synonym: Rnap Subunit Beta,Rna Polymerase Subunit Beta,Tran Subunit Beta;
Ec: 2.7.7.6
Engineered: Yes
Organism_scientific: Thermus Thermophilus (Strain Hb27 At 163 Dsm 7039);
Organism_taxid: 262724
Strain: Hb27 Atcc Baa-163 Dsm 7039
Gene: Rpob, Tt_c1461
Expression_system: Thermus Thermophilus
Expression_system_taxid: 274

Molecule: Dna-Directed Rna Polymerase Subunit Beta'
Chain: D
Synonym: Rnap Subunit Beta',Rna Polymerase Subunit Beta', Transcriptase Subunit Beta';
Ec: 2.7.7.6
Engineered: Yes
Organism_scientific: Thermus Thermophilus (Strain Hb27 At 163 Dsm 7039);
Organism_taxid: 262724
Strain: Hb27 Atcc Baa-163 Dsm 7039
Gene: Rpoc, Tt_c1460
Expression_system: Thermus Thermophilus
Expression_system_taxid: 274

Molecule: Dna-Directed Rna Polymerase Subunit Omega
Chain: E
Synonym: Rnap Omega Subunit,Rna Polymerase Omega Subunit, Transcriptase Subunit Omega;
Ec: 2.7.7.6
Engineered: Yes
Organism_scientific: Thermus Thermophilus (Strain Hb27 At 163 Dsm 7039);
Organism_taxid: 262724
Strain: Hb27 Atcc Baa-163 Dsm 7039
Gene: Rpoz, Tt_c1196
Expression_system: Thermus Thermophilus
Expression_system_taxid: 274

Molecule: Rna Polymerase Sigma Factor Siga
Chain: F
Engineered: Yes
Organism_scientific: Thermus Thermophilus (Strain Hb27 At 163 Dsm 7039);
Organism_taxid: 262724
Strain: Hb27 Atcc Baa-163 Dsm 7039
Gene: Siga, Rpod, Tt_c0164
Expression_system: Thermus Thermophilus
Expression_system_taxid: 274

Molecule: Dna (5'- D(Ptpgpcpaptpcpapgpapgpcpcpcpapapapa)-3');
Chain: G
Engineered: Yes
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Expression_system: Synthetic Construct
Expression_system_taxid: 32630

Molecule: Dna (5'- D(Tpaptpapaptpgpgpgpapgpcpcptpcptpgpaptp 3');
Chain: H
Engineered: Yes
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Expression_system: Synthetic Construct
Expression_system_taxid: 32630
symmetry Space Group: C 1 2 1
R_factor 0.201 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
185.221 101.315 294.279 90.00 98.89 90.00
method X-Ray Diffractionresolution 2.99 Å
ligand KNG, MG, ZN enzyme Transferase E.C.2.7.7.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


C


D


E


F
  • bacterial sigma factor activ...


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  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1196 Kb) [Save to disk]
  • Biological Unit Coordinates (6cuu.pdb1.gz) 1183 Kb
  • LPC: Ligand-Protein Contacts for 6CUU
  • CSU: Contacts of Structural Units for 6CUU
  • Structure Factors (2851 Kb)
  • Retrieve 6CUU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CUU from S2C, [Save to disk]
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    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6cuu_F] [6cuu_B] [6cuu_D] [6cuu_H] [6cuu_E] [6cuu_A] [6cuu_G] [6cuu_C]
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