6DYY	Hydrolase Hydrolase Inhibitor	date	Jul 02, 2018
title	Crystal Structure Of Helicobacter Pylori 5'-Methylthioadenos Adenosyl Homocysteine Nucleosidase (Mtan) Complexed With (3 ((4-Amino-5h-Pyrrolo[3,2-D]Pyrimidin-7-Yl)Methyl)-4-(((3-(1 1,2,3-Triazol-4-Yl)Propyl)Thio)Methyl)Pyrrolidin-3-Ol
authors	R.K.Harijan, R.G.Ducati, J.B.Bonanno, S.C.Almo, V.L.Schramm
compound		source
Molecule: 5'-Methylthioadenosines-Adenosylhomocysteine Nuc Chain: A, B, C, D Ec: 3.2.2.9 Engineered: Yes		Organism_scientific: Helicobacter Pylori Organism_common: Campylobacter Pylori Organism_taxid: 210 Gene: Bw246_00770, Bzl55_04980, Cep79_03920 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.179 R_Free 0.203
crystal cell	length a length b length c angle alpha angle beta angle gamma 72.564 74.028 176.887 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.61 Å
ligand	EDO, MG, OS6	enzyme	Hydrolase E.C.3.2.2.9 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	"Selective inhibitors of H. pylori methylthioadenosine nucleosidase and human methylthioadenosine phosphorylase"., Harijan RK, Hoff O, Ducati RG, Firestone RS, Hirsch BM, Evans GB, Schramm VL, Tyler PC, J Med Chem. 2019 Mar 12. doi: 10.1021/acs.jmedchem.8b01642. PMID:30860833

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk] Biological Unit Coordinates (6dyy.pdb1.gz) 83 Kb Biological Unit Coordinates (6dyy.pdb2.gz) 82 Kb LPC: Ligand-Protein Contacts for 6DYY CSU: Contacts of Structural Units for 6DYY Structure Factors (3401 Kb) Retrieve 6DYY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6DYY from S2C, [Save to disk]

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6dyy_B] [6dyy_C] [6dyy_A] [6dyy_D] SWISS-PROT database: Domain organization of by SWISSPFAM

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