6E8R Protein Transport date Jul 31, 2018
title Structure Of The Snx32 Px Domain In Complex With Chlamydial Ince In Space Group I121
authors B.Paul, B.Collins
compound source
Molecule: Sorting Nexin-32
Chain: A, B
Synonym: Sorting Nexin-6b
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Snx32, Snx6b
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pgex-4t-2

Molecule: Ince
Chain: C, D
Engineered: Yes

Organism_scientific: Chlamydia Trachomatis
Organism_taxid: 813
Gene: Ince
Expression_system: Synthetic Construct
Expression_system_taxid: 32630
symmetry Space Group: I 1 2 1
R_factor 0.186 R_Free 0.239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
90.877 46.004 134.207 90.00 105.59 90.00
method X-Ray Diffractionresolution 2.27 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (6e8r.pdb1.gz) 54 Kb
  • Biological Unit Coordinates (6e8r.pdb2.gz) 53 Kb
  • CSU: Contacts of Structural Units for 6E8R
  • Structure Factors (248 Kb)
  • Retrieve 6E8R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6E8R from S2C, [Save to disk]
  • View 6E8R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6E8R
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6e8r from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6e8r_D] [6e8r_B] [6e8r_C] [6e8r_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6E8R
  • Community annotation for 6E8R at PDBWiki (http://pdbwiki.org)

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