6ECB Vlm2 thioesterase domain wild type structure 1 date
authors Alonzo, D.A., Schmeing, T.M.
compound source
R_Free 0.1877
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70

Primary referenceTrapping biosynthetic acyl-enzyme intermediates with encoded 2,3-diaminopropionic acid., Huguenin-Dezot N, Alonzo DA, Heberlig GW, Mahesh M, Nguyen DP, Dornan MH, Boddy CN, Schmeing TM, Chin JW, Nature. 2018 Dec 12. pii: 10.1038/s41586-018-0781-z. doi:, 10.1038/s41586-018-0781-z. PMID:30542153
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (134 Kb) [Save to disk]
  • Biological Unit Coordinates (6ecb.pdb1.gz) 129 Kb
  • CSU: Contacts of Structural Units for 6ECB
  • Structure Factors (2269 Kb)
  • Retrieve 6ECB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ECB from S2C, [Save to disk]
  • View 6ECB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6ECB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ecb_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6ECB
  • Community annotation for 6ECB at PDBWiki (http://pdbwiki.org)

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