6EG2 Hydrolase Hydrolase Inhibitor date Aug 17, 2018
title Crystal Structure Of Human Brm In Complex With Compound 16
authors X.Zhu, R.Kulathila, T.Hu, X.Xie
compound source
Molecule: Maltosemaltodextrin-Binding Periplasmic Protein, Global Transcription Activator Snf2l2;
Chain: A
Synonym: Mmbp,Maltodextrin-Binding Protein,Maltose-Binding Mbp,Atp-Dependent Helicase Smarca2,Brg1-Associated Factor 1 Baf190b,Protein Brahma Homolog,Hbrm,Snf2-Alpha,Swisnf-Rela Matrix-Associated Actin-Dependent Regulator Of Chromatin Su Member 2;
Ec: 3.6.4.-
Engineered: Yes
Organism_scientific: Escherichia Coli O157:H7, Homo Sapiens
Organism_common: Human
Organism_taxid: 83334, 9606
Gene: Male, Z5632, Ecs5017, Smarca2, Baf190b, Brm, Snf2a, S
Expression_system: Escherichia Coli, Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 42 21 2
R_factor 0.251 R_Free 0.304
crystal
cell
length a length b length c angle alpha angle beta angle gamma
136.790 136.790 120.690 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.98 Å
ligand IPA, J7J enzyme Hydrolase E.C.3.6.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • carbohydrate transmembrane t...


  • Primary referenceDiscovery of Orally Active Inhibitors of Brahma Homolog (BRM)/ SWI/SNF Related Matrix Associated Actin Dependent Regulator Of Chromatin Subfamily A Member 2 (SMARCA2) ATPase Activity for the Treatment of Brahma Related Gene 1 (BRG1)/ SMARCA4-Mutant Cancers., Papillon JPN, Nakajima K, Adair CD, Hempel J, Jouk AO, Karki R, Mathieu S, Moebitz H, Ntaganda R, Smith T, Visser M, Hill SE, Kellermann Hurtado F, Chenail G, Bhang HC, Bric A, Xiang K, Bushold G, Gilbert T, Vattay A, Dooley J, Costa EA, Park I, Li A, Farley D, Lounkine E, Yue QK, Xie X, Zhu X, Kulathila R, King D, Hu T, Vulic K, Cantwell J, Luu C, Jagani Z, J Med Chem. 2018 Oct 19. doi: 10.1021/acs.jmedchem.8b01318. PMID:30339381
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (6eg2.pdb1.gz) 197 Kb
  • LPC: Ligand-Protein Contacts for 6EG2
  • CSU: Contacts of Structural Units for 6EG2
  • Structure Factors (978 Kb)
  • Retrieve 6EG2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6EG2 from S2C, [Save to disk]
  • View 6EG2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6EG2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1n6eg2, region G:39-319 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6eg2_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6EG2
  • Community annotation for 6EG2 at PDBWiki (http://pdbwiki.org)

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