6EIE Signaling Protein date Sep 19, 2017
title Ras Guanine Nucleotide Exchange Factor Sos2 (Rem-Cdc25), Wit Mutations
authors R.C.Hillig, D.Moosmayer, J.Mastouri
compound source
Molecule: Son Of Sevenless Homolog 2
Chain: A
Synonym: Sos-2
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sos2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43
R_factor 0.218 R_Free 0.285
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.970 53.970 183.793 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.72 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of potent SOS1 inhibitors that block RAS activation via disruption of the RAS-SOS1 interaction., Hillig RC, Sautier B, Schroeder J, Moosmayer D, Hilpmann A, Stegmann CM, Werbeck ND, Briem H, Boemer U, Weiske J, Badock V, Mastouri J, Petersen K, Siemeister G, Kahmann JD, Wegener D, Bohnke N, Eis K, Graham K, Wortmann L, von Nussbaum F, Bader B, Proc Natl Acad Sci U S A. 2019 Feb 12;116(7):2551-2560. doi:, 10.1073/pnas.1812963116. Epub 2019 Jan 25. PMID:30683722
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (167 Kb) [Save to disk]
  • Biological Unit Coordinates (6eie.pdb1.gz) 163 Kb
  • CSU: Contacts of Structural Units for 6EIE
  • Structure Factors (79 Kb)
  • Retrieve 6EIE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6EIE from S2C, [Save to disk]
  • View 6EIE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6EIE
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6eie from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6eie_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6EIE
  • Community annotation for 6EIE at PDBWiki (http://pdbwiki.org)

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