6EKJ Replication date Sep 26, 2017
title Crystal Structure Of Mammalian Rev7 In Complex With Human Ch Alignment-Maintaining Phosphoprotein 1
authors F.Huber, L.Tropia, S.Emamzadah, T.Halazonetis
compound source
Molecule: Mitotic Spindle Assembly Checkpoint Protein Mad2b
Chain: A
Synonym: Mitotic Arrest Deficient 2-Like Protein 2,Mad2-Lik 2;
Engineered: Yes
Mutation: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Mad2l2, Mad2b, Rev7
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Chromosome Alignment-Maintaining Phosphoprotein 1
Chain: B
Fragment: 328-355
Synonym: Zinc Finger Protein 828
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Champ1, C13orf8, Camp, Champ, Kiaa1802, Znf828
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: P 21 21 21
R_factor 0.241 R_Free 0.261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.260 51.620 126.000 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (6ekj.pdb1.gz) 39 Kb
  • CSU: Contacts of Structural Units for 6EKJ
  • Structure Factors (294 Kb)
  • Retrieve 6EKJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6EKJ from S2C, [Save to disk]
  • View 6EKJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6EKJ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6ekj from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ekj_A] [6ekj_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6EKJ
  • Community annotation for 6EKJ at PDBWiki (http://pdbwiki.org)

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