6EP4 Hydrolase date Oct 10, 2017
title Human Butyrylcholinesterase In Complex With Decamethonium
authors F.Nachon, X.Brazzolotto, M.Wandhammer, M.Trovaslet-Leroy, T.L.Ro I.R.Macdonald, S.Darvesh
compound source
Molecule: Cholinesterase
Chain: A
Synonym: Acylcholine Acylhydrolase,Butyrylcholine Esterase, Esterase II,Pseudocholinesterase;
Ec: 3.1.1.8
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bche, Che1
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_cell_line: Cho-K1
Expression_system_plasmid: Pgs
symmetry Space Group: I 4 2 2
R_factor 0.179 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
154.860 154.860 132.230 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand CL, DME, FUL, NAG, SO4 enzyme Hydrolase E.C.3.1.1.8 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceComparison of the Binding of Reversible Inhibitors to Human Butyrylcholinesterase and Acetylcholinesterase: A Crystallographic, Kinetic and Calorimetric Study., Rosenberry TL, Brazzolotto X, Macdonald IR, Wandhammer M, Trovaslet-Leroy M, Darvesh S, Nachon F, Molecules. 2017 Nov 29;22(12). pii: molecules22122098. doi:, 10.3390/molecules22122098. PMID:29186056
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (190 Kb) [Save to disk]
  • Biological Unit Coordinates (6ep4.pdb1.gz) 184 Kb
  • LPC: Ligand-Protein Contacts for 6EP4
  • CSU: Contacts of Structural Units for 6EP4
  • Structure Factors (1236 Kb)
  • Retrieve 6EP4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6EP4 from S2C, [Save to disk]
  • View 6EP4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6EP4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ep4_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6EP4
  • Community annotation for 6EP4 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science