6EPE Hydrolase date Oct 11, 2017
title Substrate Processing State 26s Proteasome (Sps2)
authors Q.Guo, C.Lehmer, A.Martinez-Sanchez, T.Rudack, F.Beck, H.Hartmann M.S.Hipp, F.U.Hartl, D.Edbauer, W.Baumeister, R.Fernandez-Busna
compound source
Molecule: Proteasome Subunit Alpha Type-6
Chain: A
Synonym: Macropain Iota Chain,Multicatalytic Endopeptidase Iota Chain,Proteasome Iota Chain;
Ec: 3.4.25.1
 Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Alpha Type-2
Chain: B
Synonym: Macropain Subunit C3,Multicatalytic Endopeptidase Subunit C3,Proteasome Component C3;
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Alpha Type-4
Chain: C
Synonym: Macropain Subunit C9,Multicatalytic Endopeptidase Subunit C9,Proteasome Component C9,Proteasome Subunit L;
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Alpha Type-7
Chain: D
Synonym: Proteasome Subunit Rc6-1
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Alpha Type-5
Chain: E
Synonym: Macropain Zeta Chain,Multicatalytic Endopeptidase Zeta Chain,Proteasome Zeta Chain;
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Alpha Type-1
Chain: F
Synonym: Macropain Subunit C2,Multicatalytic Endopeptidase Subunit C2,Proteasome Component C2,Proteasome Nu Chain;
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Alpha Type-3
Chain: G
Synonym: Macropain Subunit C8,Multicatalytic Endopeptidase Subunit C8,Proteasome Component C8,Proteasome Subunit K;
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Beta Type-6
Chain: 1
Synonym: Macropain Delta Chain,Multicatalytic Endopeptidase Delta Chain,Proteasome Chain 5,Proteasome Delta Chain,Prote Subunit Y;
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Beta Type-7
Chain: 2
Synonym: Macropain Chain Z,Multicatalytic Endopeptidase Com Z,Proteasome Subunit Z;
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Beta Type-3
Chain: 3
Synonym: Proteasome Chain 13,Proteasome Component C10-II,Pr Theta Chain;
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Beta Type-2
Chain: 4
Synonym: Macropain Subunit C7-I,Multicatalytic Endopeptidas Subunit C7-I,Proteasome Component C7-I;
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Beta Type-5
Chain: 5
Synonym: Macropain Epsilon Chain,Multicatalytic Endopeptida Epsilon Chain,Proteasome Chain 6,Proteasome Epsilon Chain,P Subunit X;
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Beta Type-1
Chain: 6
Synonym: Macropain Subunit C5,Multicatalytic Endopeptidase Subunit C5,Proteasome Component C5,Proteasome Gamma Chain;
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome Subunit Beta Type-4
Chain: 7
Synonym: Macropain Beta Chain,Multicatalytic Endopeptidase Beta Chain,Proteasome Beta Chain,Proteasome Chain 3,Rn3;
Ec: 3.4.25.1
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: 26s Proteasome Subunit S5a
Chain: W
Synonym: Psmd4 Protein
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome (Prosome, Macropain) 26s Subunit, Non- 14;
Chain: V
Synonym: Proteasome 26s Subunit,Non-Atpase 14,Psmd14 Protei Rcg26455,Isoform Cra_b;
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome 26s Subunit, Non-Atpase 8
Chain: T
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Rcg28037
Chain: Y
Synonym: Sem1,26s Proteasome Complex Subunit
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: 26s Proteasome Non-Atpase Regulatory Subunit 2
Chain: Z
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: 26s Proteasome Non-Atpase Regulatory Subunit 1
Chain: N
Synonym: 26s Proteasome Regulatory Subunit Rpn2,26s Proteas Regulatory Subunit S1,26s Proteasome Subunit P112;
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome (Prosome, Macropain) 26s Subunit, Non-
Chain: S
Synonym: Proteasome (Prosome,Macropain) 26s Subunit,Non-Atp Isoform Cra_b,Proteasome 26s Subunit,Non-Atpase 3;
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome (Prosome, Macropain) 26s Subunit, Non- 12;
Chain: P
Synonym: Proteasome 26s Subunit,Non-Atpase 12
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: 26s Proteasome Non-Atpase Regulatory Subunit 11
Chain: Q
Synonym: 26s Proteasome Regulatory Subunit Rpn6
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome (Prosome, Macropain) 26s Subunit, Non-
Chain: R
Synonym: Proteasome (Prosome,Macropain) 26s Subunit,Non-Atp Isoform Cra_a,Proteasome 26s Subunit,Non-Atpase 6;
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome (Prosome, Macropain) 26s Subunit, Non- (Predicted);
Chain: U
Synonym: Proteasome 26s Subunit,Non-Atpase 7
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: 26s Proteasome Non-Atpase Regulatory Subunit 13
Chain: O
Synonym: 26s Proteasome Regulatory Subunit Rpn9,26s Proteas Regulatory Subunit S11,26s Proteasome Regulatory Subunit P4
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: 26s Proteasome Regulatory Subunit 7
Chain: H
Synonym: 26s Proteasome Aaa-Atpase Subunit Rpt1,Proteasome Subunit Atpase 2,Protein Mss1;
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: 26s Proteasome Regulatory Subunit 4
Chain: I
Synonym: P26s4,26s Proteasome Aaa-Atpase Subunit Rpt2,Prote Subunit Atpase 1;
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: 26s Proteasome Regulatory Subunit 6b
Chain: K
Synonym: 26s Proteasome Aaa-Atpase Subunit Rpt3,Proteasome Subunit Atpase 4,S6 Atpase,Tat-Binding Protein 7,Tbp-7;
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: Proteasome 26s Subunit, Atpase 6
Chain: L
Synonym: Rcg61291
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: 26s Proteasome Regulatory Subunit 6a
Chain: M
Synonym: Proteasome (Prosome,Macropain) 26s Subunit,Atpase Cra_a;
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116

Molecule: 26s Proteasome Regulatory Subunit 8
Chain: J
Synonym: 26s Proteasome Aaa-Atpase Subunit Rpt6,Proteasome Subunit Atpase 5,Proteasome Subunit P45,Thyroid Hormone Rec Interacting Protein 1,Trip1,P45sug
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 12.80 Å
ligand
enzyme Hydrolase E.C.3.4.25.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
1


2


3


4


5


6


7


A


B


C


D


E


F


G


H
  • proteasome-activating ATPase...


    • I
  • proteasome-activating ATPase...


    • J


    K
  • proteasome-activating ATPase...


    • L


    M


    N
  • enzyme regulator activity


    • O


    P


    Q


    R
  • enzyme regulator activity


    • S
  • enzyme regulator activity


    • T


    U


    V
  • endopeptidase activator acti...


    • W


    Y


    Z
  • enzyme regulator activity


    • Primary referenceIn Situ Structure of Neuronal C9orf72 Poly-GA Aggregates Reveals Proteasome Recruitment., Guo Q, Lehmer C, Martinez-Sanchez A, Rudack T, Beck F, Hartmann H, Perez-Berlanga M, Frottin F, Hipp MS, Hartl FU, Edbauer D, Baumeister W, Fernandez-Busnadiego R, Cell. 2018 Feb 8;172(4):696-705.e12. doi: 10.1016/j.cell.2017.12.030. Epub 2018, Feb 1. PMID:29398115
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1433 Kb) [Save to disk]
  • Biological Unit Coordinates (6epe.pdb1.gz) 1420 Kb
  • CSU: Contacts of Structural Units for 6EPE
  • Retrieve 6EPE in mmCIF format [Save to disk]
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  • View one-letter amino acid or nucleotide sequence for each chain: [6epe_G] [6epe_M] [6epe_P] [6epe_K] [6epe_R] [6epe_L] [6epe_U] [6epe_I] [6epe_1] [6epe_7] [6epe_T] [6epe_B] [6epe_5] [6epe_H] [6epe_J] [6epe_C] [6epe_S] [6epe_A] [6epe_W] [6epe_E] [6epe_3] [6epe_O] [6epe_Y] [6epe_N] [6epe_F] [6epe_6] [6epe_4] [6epe_Z] [6epe_V] [6epe_Q] [6epe_D] [6epe_2]
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