6EQX Hydrolase date Oct 16, 2017
title X-Ray Structure Of The Proprotein Convertase Furin Bound Wit Competitive Inhibitor Arg-Arg-Arg-Val-Arg-Amba
authors S.O.Dahms, M.E.Than
compound source
Molecule: Furin
Chain: A
Synonym: Dibasic-Processing Enzyme,Paired Basic Amino Acid Cleaving Enzyme,Pace;
Ec: 3.4.21.75
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Furin, Fur, Pace, Pcsk3
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293s

Molecule: Arg-Arg-Arg-Val-Arg-00s
Chain: D
Engineered: Yes

Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Expression_system: Synthetic Construct
Expression_system_taxid: 32630
symmetry Space Group: P 65 2 2
R_factor 0.162 R_Free 0.184
crystal
cell
length a length b length c angle alpha angle beta angle gamma
131.805 131.805 155.347 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.99 Å
ligand 00S, CA, CL, NA enzyme Hydrolase E.C.3.4.21.75 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray Structures of the Proprotein Convertase Furin Bound with Substrate Analogue Inhibitors Reveal Substrate Specificity Determinants beyond the S4 Pocket., Dahms SO, Hardes K, Steinmetzer T, Than ME, Biochemistry. 2018 Feb 13;57(6):925-934. doi: 10.1021/acs.biochem.7b01124. Epub, 2018 Jan 26. PMID:29314830
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (6eqx.pdb1.gz) 84 Kb
  • LPC: Ligand-Protein Contacts for 6EQX
  • CSU: Contacts of Structural Units for 6EQX
  • Structure Factors (394 Kb)
  • Retrieve 6EQX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6EQX from S2C, [Save to disk]
  • View 6EQX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6EQX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6eqx_A] [6eqx_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6EQX
  • Community annotation for 6EQX at PDBWiki (http://pdbwiki.org)

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