6ES3	Transcription	date	Oct 19, 2017
title	Structure Of Cdx2-Dna(Tcg)
authors	E.Morgunova, Y.Yin, A.Jolma, A.Popov, J.Taipale
compound		source
Molecule: Dna (5'- D(Ptptpgptpgptptptptpapcpgpapcpcptpcpc)-3 Chain: A, B Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
Molecule: Homeobox Protein Cdx-2 Chain: K, M Synonym: Cdx-3,Caudal-Type Homeobox Protein 2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cdx2, Cdx3 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Petg20a-Sbp
Molecule: Dna (5'- D(Pgpgpapgpgptpcpgptpapapapapcpapcpapa)-3 Chain: F, E Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
symmetry	Space Group: C 1 2 1	R_factor 0.216 R_Free 0.278
crystal cell	length a length b length c angle alpha angle beta angle gamma 127.950 46.490 68.890 90.00 113.27 90.00
method	X-Ray Diffraction	resolution	2.57 Å
Gene Ontology	Chain Function Process Component M, K
Primary reference	Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima., Morgunova E, Yin Y, Das PK, Jolma A, Zhu F, Popov A, Xu Y, Nilsson L, Taipale J, Elife. 2018 Apr 11;7. pii: 32963. doi: 10.7554/eLife.32963. PMID:29638214

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk] Biological Unit Coordinates (6es3.pdb1.gz) 58 Kb Biological Unit Coordinates (6es3.pdb2.gz) 58 Kb CSU: Contacts of Structural Units for 6ES3 Structure Factors (159 Kb) Retrieve 6ES3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6ES3 from S2C, [Save to disk]

View 6ES3 in 3D

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Visual 3D analysis of 6ES3

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6es3_E] [6es3_M] [6es3_A] [6es3_B] [6es3_K] [6es3_F] SWISS-PROT database: Domain organization of by SWISSPFAM

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