6EWO Immune System date Nov 06, 2017
title Crystal Structure Of Non-Phosphorylated Form Of Rtf Phosphop Bound To Hla-A2 In Complex With Lilrb1
authors F.Mohammed, D.H.Stones, B.E.Willcox
compound source
Molecule: Hla Class I Histocompatibility Antigen, A-2 Alpha
Chain: A, E
Synonym: Mhc Class I Antigen A2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hla-A, Hlaa
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgmt7

Molecule: Beta-2-Microglobulin
Chain: B, F
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: B2m, Cdabp0092, Hdcma22p
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgmt7

Molecule: Synemin
Chain: C, G
Synonym: Desmuslin
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Commercial Synthesis

Molecule: Lir-1
Chain: D, H
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Lilrb1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet23a
symmetry Space Group: P 32 2 1
R_factor 0.232 R_Free 0.276
crystal
cell
length a length b length c angle alpha angle beta angle gamma
116.300 116.300 192.600 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
Gene
Ontology
ChainFunctionProcessComponent
F, B
  • cellular response to iron io...

  • Primary referenceApplication of the immunoregulatory receptor LILRB1 as a crystallisation chaperone for human class I MHC complexes., Mohammed F, Stones DH, Willcox BE, J Immunol Methods. 2018 Oct 24. pii: S0022-1759(18)30250-3. doi:, 10.1016/j.jim.2018.10.011. PMID:30365927
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (192 Kb) [Save to disk]
  • Biological Unit Coordinates (6ewo.pdb1.gz) 96 Kb
  • Biological Unit Coordinates (6ewo.pdb2.gz) 94 Kb
  • CSU: Contacts of Structural Units for 6EWO
  • Structure Factors (1972 Kb)
  • Retrieve 6EWO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6EWO from S2C, [Save to disk]
  • View 6EWO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6EWO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ewo_F] [6ewo_C] [6ewo_D] [6ewo_B] [6ewo_E] [6ewo_G] [6ewo_A] [6ewo_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6EWO
  • Community annotation for 6EWO at PDBWiki (http://pdbwiki.org)

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