6F7B Transferase date Dec 08, 2017
title Crystal Structure Of The Human Bub1 Kinase Domain In Complex 1816032
authors S.J.Holton, G.Siemeister, A.Mengel, W.Bone, J.Schroeder, S.Zitzma H.Briem, A.Fernandez-Montalvan, S.Prechtl, U.Moenning, O.Von Ah J.Johanssen, A.Cleve, V.Puetter, M.Hitchcock, F.Von Nussbaum, M. D.Mumberg, K.Ziegelbauer
compound source
Molecule: Mitotic Checkpoint Serinethreonine-Protein Kinas
Chain: A
Synonym: Hbub1,Bub1a
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bub1, Bub1l
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
symmetry Space Group: P 21 2 21
R_factor 0.198 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.497 60.093 124.469 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CVQ, MG, SEP enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInhibition of BUB1 Kinase by BAY 1816032 Sensitizes Tumor Cells toward Taxanes, ATR, and PARP Inhibitors In Vitro and In Vivo., Siemeister G, Mengel A, Fernandez-Montalvan AE, Bone W, Schroder J, Zitzmann-Kolbe S, Briem H, Prechtl S, Holton SJ, Monning U, von Ahsen O, Johanssen S, Cleve A, Putter V, Hitchcock M, von Nussbaum F, Brands M, Ziegelbauer K, Mumberg D, Clin Cancer Res. 2019 Feb 15;25(4):1404-1414. doi: 10.1158/1078-0432.CCR-18-0628., Epub 2018 Nov 14. PMID:30429199
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (6f7b.pdb1.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 6F7B
  • CSU: Contacts of Structural Units for 6F7B
  • Structure Factors (287 Kb)
  • Retrieve 6F7B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6F7B from S2C, [Save to disk]
  • View 6F7B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6F7B
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6f7b_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6F7B
  • Community annotation for 6F7B at PDBWiki (http://pdbwiki.org)

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