OCA Atlas for 6FCS

6FCS

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

66N, ACT, AMU, AMV, API, DAL, DGL, MAG, NAG, NM6

enzyme

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

Exolytic and endolytic turnover of peptidoglycan by lytic transglycosylase Slt of Pseudomonas aeruginosa., Lee M, Batuecas MT, Tomoshige S, Dominguez-Gil T, Mahasenan KV, Dik DA, Hesek D, Millan C, Uson I, Lastochkin E, Hermoso JA, Mobashery S, Proc Natl Acad Sci U S A. 2018 Apr 9. pii: 1801298115. doi:, 10.1073/pnas.1801298115. PMID:29632171

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]

Biological Unit Coordinates (6fcs.pdb1.gz) 105 Kb

LPC: Ligand-Protein Contacts for 6FCS

CSU: Contacts of Structural Units for 6FCS

Structure Factors (572 Kb)

Retrieve 6FCS in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 6FCS from S2C, [Save to disk]

View 6FCS in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6FCS

Cartoon representation from PDB Cartoon

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Crystal Contacts, from CryCo at Weizmann Institute

Fold representative 6fcs from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6fcs_A] [6fcs_B]

SWISS-PROT database:

Domain organization of by SWISSPFAM

Other resources with information on 6FCS

Community annotation for 6FCS at PDBWiki (http://pdbwiki.org)

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