6FQR Rna Binding Protein date Feb 14, 2018
title Crystal Structure Of Imp3 Rrm12 In Complex With Rna (Cccc)
authors M.Jia, H.Gut, A.J.Chao
compound source
Molecule: Insulin-Like Growth Factor 2 Mrna-Binding Protein
Chain: A, B
Synonym: Imp-3,Igf-II Mrna-Binding Protein 3,Kh Domain-Cont Protein Overexpressed In Cancer,Hkoc,Vickz Family Member 3;
Engineered: Yes
Other_details: N-Terminal Left Residues (Ggs) Due To Tev Cl C-Terminal His6 Tag;
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Igf2bp3, Imp3, Koc1, Vickz3
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Rosetta2

Molecule: Rna Cccc
Chain: C
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1
R_factor 0.167 R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
30.060 41.190 72.270 92.14 100.40 108.65
method X-Ray Diffractionresolution 2.10 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural basis of IMP3 RRM12 recognition of RNA., Jia M, Gut H, Chao JA, RNA. 2018 Aug 22. pii: rna.065649.118. doi: 10.1261/rna.065649.118. PMID:30135093
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (6fqr.pdb1.gz) 58 Kb
  • CSU: Contacts of Structural Units for 6FQR
  • Structure Factors (146 Kb)
  • Retrieve 6FQR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6FQR from S2C, [Save to disk]
    • View 6FQR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6FQR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6fqr_B] [6fqr_A] [6fqr_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6FQR
  • Community annotation for 6FQR at PDBWiki (http://pdbwiki.org)

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