6FSD Protein Binding date Feb 19, 2018
title Mus Musculus Acetylcholinesterase In Complex With 2-(4-Biphe N-[3-(1-Piperidinyl)Propyl]-Acetamide Hydrochloride (10)
authors S.Knutsson, C.Engdahl, R.Kumari, T.Kindahl, N.Forsgren, C.Lindgre S.Kitur, L.Kamau, F.Ekstrom, A.Linusson
compound source
Molecule: Acetylcholinesterase
Chain: A, B
Synonym: Ache
Ec: 3.1.1.7
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Ache
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293f Cells
symmetry Space Group: P 21 21 21
R_factor 0.191 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.013 110.327 227.261 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand 1PG, E5H, PG0, TOE enzyme Hydrolase E.C.3.1.1.7 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceNon-covalent Inhibitors of Mosquito Acetylcholinesterase 1 with Resistance-Breaking Potency., Knutsson S, Engdahl C, Kumari R, Forsgren N, Lindgren C, Kindahl T, Kitur S, Wachira L, Kamau L, Ekstrom FJ, Linusson A, J Med Chem. 2018 Oct 19. doi: 10.1021/acs.jmedchem.8b01060. PMID:30339371
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (175 Kb) [Save to disk]
  • Biological Unit Coordinates (6fsd.pdb1.gz) 170 Kb
  • LPC: Ligand-Protein Contacts for 6FSD
  • CSU: Contacts of Structural Units for 6FSD
  • Structure Factors (1720 Kb)
  • Retrieve 6FSD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6FSD from S2C, [Save to disk]
    • View 6FSD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6FSD
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6fsd_A] [6fsd_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6FSD
  • Community annotation for 6FSD at PDBWiki (http://pdbwiki.org)

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