6FUU Dna Binding Protein date Feb 27, 2018
title Transcriptional Regulator Lmrr With Bound Heme
authors E.R.Reddem, A.M.W.H.Thunnissen
compound source
Molecule: Transcriptional Regulator Padr Family
Chain: A
Synonym: Transcriptional Regulator,Acidobacterial,Padr-Fami
Engineered: Yes
Other_details: Residues 1-4, 70-73 And 109-126 Are Not Incl The Model Due To Weakabsent Electron Density
 Organism_scientific: Lactococcus Lactis Subsp. Cremoris
Organism_common: Streptococcus Cremoris
Organism_taxid: 1359
Gene: Ncdo763_1045, Vn96_2738
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43 21 2
R_factor 0.212 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.145 35.145 180.668 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand HEM enzyme
Primary referenceAn Artificial Heme Enzyme for Cyclopropanation Reactions., Villarino L, Splan K, Reddem E, Gutierrez de Souza C, Alonso-Cotchico L, Lledos A, Marechal JD, Thunnissen AM, Roelfes G, Angew Chem Int Ed Engl. 2018 May 2. doi: 10.1002/anie.201802946. PMID:29719099
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (6fuu.pdb1.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 6FUU
  • CSU: Contacts of Structural Units for 6FUU
  • Structure Factors (463 Kb)
  • Retrieve 6FUU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6FUU from S2C, [Save to disk]
    • View 6FUU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6FUU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6fuu_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6FUU
  • Community annotation for 6FUU at PDBWiki (http://pdbwiki.org)

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