6FXR	Transferase	date	Mar 09, 2018
title	Crystal Structure Of Full-Length Human Lysyl Hydroxylase Lh3 Cocrystal With Fe2+, Mn2+, Udp-Gal
authors	L.Scietti, A.Chiapparino, F.De Giorgi, M.Fumagalli, L.Khoriauli, S.Nergadze, S.Basu, V.Olieric, B.Banushi, E.Giulotto, P.Gissen, F
compound		source
Molecule: Procollagen-Lysine,2-Oxoglutarate 5-Dioxygenase 3 Chain: A Synonym: Lysyl Hydroxylase 3,Lh3 Ec: 1.14.11.4 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Plod3 Expression_system: Homo Sapiens Expression_system_taxid: 9606 Expression_system_cell: Hela Expression_system_plasmid: Ppuro-Dhfr
symmetry	Space Group: C 2 2 21	R_factor 0.218 R_Free 0.237
crystal cell	length a length b length c angle alpha angle beta angle gamma 97.801 100.268 224.895 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	AKG, FE2, GOL, MN, NAG, UDP	enzyme	Oxidoreductase E.C.1.14.11.4 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Molecular architecture of the multifunctional collagen lysyl hydroxylase and glycosyltransferase LH3., Scietti L, Chiapparino A, De Giorgi F, Fumagalli M, Khoriauli L, Nergadze S, Basu S, Olieric V, Cucca L, Banushi B, Profumo A, Giulotto E, Gissen P, Forneris F, Nat Commun. 2018 Aug 8;9(1):3163. doi: 10.1038/s41467-018-05631-5. PMID:30089812

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (252 Kb) [Save to disk] Biological Unit Coordinates (6fxr.pdb1.gz) 485 Kb LPC: Ligand-Protein Contacts for 6FXR CSU: Contacts of Structural Units for 6FXR Structure Factors (2772 Kb) Retrieve 6FXR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6FXR from S2C, [Save to disk]

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Visual 3D analysis of 6FXR

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6fxr_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 6FXR at PDBWiki (http://pdbwiki.org)

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