6FZ1 Hydrolase date Mar 13, 2018
title Crystal Structure Of Lipase From Geobacillus Stearothermophi Methanol Stable Variant L360f
authors S.Gihaz, M.Kanteev, Y.Pazy, A.Fishman
compound source
Molecule: Lipase
Chain: A
Ec: 3.1.1.3
Engineered: Yes
Organism_scientific: Geobacillus Stearothermophilus
Organism_taxid: 1422
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: P 21 21 21
R_factor 0.206 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.950 71.510 113.660 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand CA, ZN enzyme Hydrolase E.C.3.1.1.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFilling the void: Introducing aromatic interactions into solvent tunnels towards lipase stability in methanol., Gihaz S, Kanteev M, Pazy Y, Fishman A, Appl Environ Microbiol. 2018 Sep 14. pii: AEM.02143-18. doi:, 10.1128/AEM.02143-18. PMID:30217852
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk]
  • Biological Unit Coordinates (6fz1.pdb1.gz) 130 Kb
  • LPC: Ligand-Protein Contacts for 6FZ1
  • CSU: Contacts of Structural Units for 6FZ1
  • Structure Factors (823 Kb)
  • Retrieve 6FZ1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6FZ1 from S2C, [Save to disk]
  • View 6FZ1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6FZ1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6fz1_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6FZ1
  • Community annotation for 6FZ1 at PDBWiki (http://pdbwiki.org)

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