6G2A Hydrolase date Mar 22, 2018
title Human [Protein Adp-Ribosylargenine] Hydrolase Arh1 In Comple Adp-Hpm
authors A.Ariza
compound source
Molecule: [Protein Adp-Ribosylarginine] Hydrolase
Chain: A
Synonym: Adp-Ribosylarginine Hydrolase,Adp-Ribose-L-Arginin Enzyme;
Ec: 3.2.2.19
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Adprh, Arh1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.181 R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
98.526 42.940 89.231 90.00 118.93 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand
enzyme Hydrolase E.C.3.2.2.19 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference(ADP-ribosyl)hydrolases: Structural Basis for Differential Substrate Recognition and Inhibition., Rack JGM, Ariza A, Drown BS, Henfrey C, Bartlett E, Shirai T, Hergenrother PJ, Ahel I, Cell Chem Biol. 2018 Nov 16. pii: S2451-9456(18)30389-1. doi:, 10.1016/j.chembiol.2018.11.001. PMID:30472116
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk]
  • Biological Unit Coordinates (6g2a.pdb1.gz) 125 Kb
  • CSU: Contacts of Structural Units for 6G2A
  • Structure Factors (212 Kb)
  • Retrieve 6G2A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6G2A from S2C, [Save to disk]
  • View 6G2A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6G2A
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6g2a from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6g2a_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6G2A
  • Community annotation for 6G2A at PDBWiki (http://pdbwiki.org)

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