6G2T Contractile Protein date Mar 23, 2018
title Human Cardiac Myosin Binding Protein C C1 Ig-Domain Bound To Cardiac Thin Filament
authors C.Risi, B.Belknap, E.Forgacs, S.P.Harris, G.F.Schroder, H.D.White V.E.Galkin
compound source
Molecule: Actin, Cytoplasmic 2
Chain: A, B, C, D, E, F
Synonym: Gamma-Actin
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Actg1, Actg
Expression_system: Homo Sapiens
Expression_system_taxid: 9606

Molecule: Myosin-Binding Protein C, Cardiac-Type
Chain: G, H, I, J, K, L
Synonym: Cardiac Mybp-C,C-Protein,Cardiac Muscle Isoform
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mybpc3
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Tropomyosin
Chain: M, N, O, P

Organism_scientific: Sus Scrofa
Organism_taxid: 9823
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 9.00 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B
  • structural constituent of po...

  • cytoskeleton
  • Primary referenceN-Terminal Domains of Cardiac Myosin Binding Protein C Cooperatively Activate the Thin Filament., Risi C, Belknap B, Forgacs-Lonart E, Harris SP, Schroder GF, White HD, Galkin VE, Structure. 2018 Aug 25. pii: S0969-2126(18)30295-8. doi:, 10.1016/j.str.2018.08.007. PMID:30270174
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (430 Kb) [Save to disk]
  • Biological Unit Coordinates (6g2t.pdb1.gz) 427 Kb
  • CSU: Contacts of Structural Units for 6G2T
  • Retrieve 6G2T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6G2T from S2C, [Save to disk]
  • View 6G2T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6G2T
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6g2t from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6g2t_M] [6g2t_H] [6g2t_B] [6g2t_L] [6g2t_K] [6g2t_J] [6g2t_N] [6g2t_F] [6g2t_P] [6g2t_I] [6g2t_C] [6g2t_G] [6g2t_E] [6g2t_O] [6g2t_A] [6g2t_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6G2T
  • Community annotation for 6G2T at PDBWiki (http://pdbwiki.org)

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