6G31	Transferase	date	Mar 24, 2018
title	Crystal Structure Of Human Geranylgeranyl Diphosphate Syntha D188y Bound To Zoledronate
authors	M.Lisnyansky, N.Kapelushnik, A.Ben-Bassat, M.Marom, A.Loewenstei D.Khananshvili, M.Giladi, Y.Haitin
compound		source
Molecule: Geranylgeranyl Pyrophosphate Synthase Chain: A, B, C, D, E, F, G, H, I, J, K, L Synonym: Ggppsase,(2e,6e)-Farnesyl Diphosphate Synthase, Dimethylallyltranstransferase,Farnesyl Diphosphate Synthase Farnesyltranstransferase,Geranylgeranyl Diphosphate Synthas Geranyltranstransferase; Ec: 2.5.1.-,2.5.1.1,2.5.1.29,2.5.1.10 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Variant: Asp188tyr Gene: Ggps1 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.256 R_Free 0.305
crystal cell	length a length b length c angle alpha angle beta angle gamma 116.800 134.240 134.460 90.00 102.67 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	MG, ZOL	enzyme	Transferase E.C.2.5.1 BRENDA
Gene Ontology	Chain Function Process Component F, A, J, K, E, B, H, C, D, I, G, L
Primary reference	Reduced Activity of GGPPS Mutant is Involved in Bisphosphonates-Induced Atypical Fractures., Lisnyansky M, Kapelushnik N, Ben-Bassat A, Marom M, Loewenstein A, Khananshvili D, Giladi M, Haitin Y, Mol Pharmacol. 2018 Oct 1. pii: mol.118.113670. doi: 10.1124/mol.118.113670. PMID:30275041

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1008 Kb) [Save to disk] Biological Unit Coordinates (6g31.pdb1.gz) 491 Kb Biological Unit Coordinates (6g31.pdb2.gz) 497 Kb LPC: Ligand-Protein Contacts for 6G31 CSU: Contacts of Structural Units for 6G31 Structure Factors (970 Kb) Retrieve 6G31 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6G31 from S2C, [Save to disk]

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6g31_G] [6g31_C] [6g31_I] [6g31_L] [6g31_E] [6g31_A] [6g31_F] [6g31_B] [6g31_H] [6g31_K] [6g31_J] [6g31_D] SWISS-PROT database: Domain organization of by SWISSPFAM

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