6G78 Transferase date Apr 04, 2018
title Rsk4 N-Terminal Kinase Domain S232e In Complex With Amp-Pnp
authors F.Prischi, M.M.Ali
compound source
Molecule: Ribosomal Protein S6 Kinase Alpha-6
Chain: A, B
Synonym: S6k-Alpha-6,90 Kda Ribosomal Protein S6 Kinase 6,P Ribosomal S6 Kinase 4,Rsk-4,Pp90rsk4;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rps6ka6, Rsk4
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-6p-1
symmetry Space Group: P 1 21 1
R_factor 0.226 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.015 110.614 66.559 90.00 90.22 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand
enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (6g78.pdb1.gz) 48 Kb
  • Biological Unit Coordinates (6g78.pdb2.gz) 47 Kb
  • CSU: Contacts of Structural Units for 6G78
  • Structure Factors (631 Kb)
  • Retrieve 6G78 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6G78 from S2C, [Save to disk]
  • View 6G78 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6G78
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6g78 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6g78_A] [6g78_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6G78
  • Community annotation for 6G78 at PDBWiki (http://pdbwiki.org)

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