6GCE	Dna Binding Protein	date	Apr 17, 2018
title	Dna Binding Domain Of Restriction Endonuclease Mcrbc In Comp 5-Formylcytosine Dna
authors	G.Sasnauskas
compound		source
Molecule: 5-Methylcytosine-Specific Restriction Enzyme B Chain: A, B Synonym: Ecokmcrbc Ec: 3.1.21.- Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 83333 Strain: K12 Gene: Mcrb, Rglb, B4346, Jw5871 Expression_system: Escherichia Coli Str. K-12 Substr. Dh10b Expression_system_taxid: 316385
Molecule: Dna (5'-D(Gpcptpap(5fc)Pcpgpgptpcptpc Chain: D Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Dna (5'-D(Gpapgpapcpcpgpgptpapgpc)-3' Chain: C Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 21 21 21	R_factor 0.167 R_Free 0.205
crystal cell	length a length b length c angle alpha angle beta angle gamma 36.175 69.988 144.265 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	5FC	enzyme	Hydrolase E.C.3.1.21 BRENDA
Primary reference	Recognition of modified cytosine variants by the DNA binding domain of methyl-directed endonuclease McrBC., Zagorskaite E, Manakova E, Sasnauskas G, FEBS Lett. 2018 Sep 8. doi: 10.1002/1873-3468.13244. PMID:30194838

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk] Biological Unit Coordinates (6gce.pdb1.gz) 146 Kb LPC: Ligand-Protein Contacts for 6GCE CSU: Contacts of Structural Units for 6GCE Structure Factors (1495 Kb) Retrieve 6GCE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6GCE from S2C, [Save to disk]

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6gce_C] [6gce_A] [6gce_B] [6gce_D] SWISS-PROT database: Domain organization of by SWISSPFAM

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