6GK2 Immune System date May 18, 2018
title Helical Reconstruction Of Bcl10 Card And Malt1 Death Domain
authors F.Schlauderer, A.Desfosses, I.Gutsche, K.P.Hopfner, K.Lammens
compound source
Molecule: B-Cell Lymphomaleukemia 10
Chain: H
Synonym: B-Cell Clllymphoma 10,Bcl-10,Card-Containing Mole Enhancing Nf-Kappa-B,Card-Like Apoptotic Protein,Hclap,Ced- Prodomain Homologous E10-Like Regulator,Ciper,Cellular Homo Vcarmen,Ccarmen,Cellular-E10,C-E10,Mammalian Card-Containin Molecule E10,Me10;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bcl10, Ciper, Clap
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Mucosa-Associated Lymphoid Tissue Lymphoma Transl Protein 1;
Chain: F
Synonym: Malt Lymphoma-Associated Translocation,Paracaspase
Ec: 3.4.22.-
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Malt1, Mlt
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.90 Å
ligand
enzyme Hydrolase E.C.3.4.22 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F


H


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (6gk2.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 6GK2
  • Retrieve 6GK2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6GK2 from S2C, [Save to disk]
  • View 6GK2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6GK2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6gk2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6gk2_F] [6gk2_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6GK2
  • Community annotation for 6GK2 at PDBWiki (http://pdbwiki.org)

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