6GO9 Fluorescent Protein date Jun 01, 2018
title Structure Of Gfpmut2 Crystallized At Ph 6 And Transferred To
authors G.Lolli, S.Raboni, E.Pasqualetto, B.Campanini, A.Mozzarelli, S.Be R.Battistutta
compound source
Molecule: Green Fluorescent Protein
Chain: A
Engineered: Yes
Mutation: Yes
Other_details: S65a, V68l, S72a: First Six Residues Gshigp From The Expression Tag
 Organism_scientific: Aequorea Victoria
Organism_taxid: 6100
Gene: Gfp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.161 R_Free 0.193
crystal
cell
length a length b length c angle alpha angle beta angle gamma
32.515 60.027 112.262 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.67 Å
ligand MPD, MRD, PIA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInsight into GFPmut2 pH Dependence by Single Crystal Microspectrophotometry and X-ray Crystallography., Lolli G, Raboni S, Pasqualetto E, Benoni R, Campanini B, Ronda L, Mozzarelli A, Bettati S, Battistutta R, J Phys Chem B. 2018 Sep 17. doi: 10.1021/acs.jpcb.8b07260. PMID:30179482
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (6go9.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 6GO9
  • CSU: Contacts of Structural Units for 6GO9
  • Structure Factors (1090 Kb)
  • Retrieve 6GO9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6GO9 from S2C, [Save to disk]
    • View 6GO9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6GO9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6go9_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6GO9
  • Community annotation for 6GO9 at PDBWiki (http://pdbwiki.org)

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