6GU8 Hydrolase date Jun 19, 2018
title Glucuronoyl Esterase From Solibacter Usitatus
authors L.Lo Leggio, J.Larsbrink, R.Meland Knudsen, S.Mazurkewich, J.C.N Poulsen
compound source
Molecule: Putative Acetyl Xylan Esterase
Chain: A
Engineered: Yes
 Organism_scientific: Candidatus Solibacter Usitatus Ellin60
Organism_taxid: 234267
Gene: Acid_4275
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: P 43 21 2
R_factor 0.184 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.579 54.579 284.112 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.02 Å
ligand EDO, MSE, PEG enzyme
Primary referenceBiochemical and structural features of diverse bacterial glucuronoyl esterases facilitating recalcitrant biomass conversion., Arnling Baath J, Mazurkewich S, Knudsen RM, Poulsen JN, Olsson L, Lo Leggio L, Larsbrink J, Biotechnol Biofuels. 2018 Aug 1;11:213. doi: 10.1186/s13068-018-1213-x., eCollection 2018. PMID:30083226
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk]
  • Biological Unit Coordinates (6gu8.pdb1.gz) 131 Kb
  • LPC: Ligand-Protein Contacts for 6GU8
  • CSU: Contacts of Structural Units for 6GU8
  • Structure Factors (967 Kb)
  • Retrieve 6GU8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6GU8 from S2C, [Save to disk]
    • View 6GU8 in 3D
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    • Visual 3D analysis of 6GU8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6gu8_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6GU8
  • Community annotation for 6GU8 at PDBWiki (http://pdbwiki.org)

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