6GYM	Transcription	date	Jun 30, 2018
title	Structure Of A Yeast Closed Complex With Distorted Dna (Ccdi
authors	C.Dienemann, B.Schwalb, S.Schilbach, P.Cramer
compound		source
Molecule: General Transcription And Dna Repair Factor Iih H Subunit Xpd,General Transcription And Dna Repair Factor Iih Subunit Xpd,Dna Repair Helicase Rad3,Dna Repair Helicase Ra Transcription And Dna Repair Factor Iih Helicase Subunit Xp Chain Synonym: Tfiih Subunit Xpd,Dna Repair Helicase Rad3,Rna Pol Transcription Factor B Subunit Rad3,Tfb Subunit Rad3,Tfiih Xpd,Dna Repair Helicase Rad3,Rna Polymerase II Transcriptio Subunit Rad3,Tfb Subunit Rad3,Tfiih Subunit Xpd,Dna Repair Rad3,Rna Polymerase II Transcription Factor B Subunit Rad3, Subunit Rad3; Ec: 3.6.4.12,3.6.4.12,3.6.4.12 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Rad3, Rem1, Yer171w Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: General Transcription And Dna Repair Factor Iih S Tfb1,General Transcription And Dna Repair Factor Iih Subuni Polymerase II Transcription Factor B Subunit 1,General Tran And Dna Repair Factor Iih Subunit Tfb1,Rna Polymerase II Transcription Factor B Subunit 1,General Transcription And Factor Iih Subunit Tfb1,General Transcription And Dna Repai Iih Subunit Tfb1,General Transcription And Dna Repair Facto Subunit Tfb1,Rna Polymerase II Transcription Factor B Subun General Transcription And Dna Repair Factor Iih Subunit Tfb Polymerase II Transcription Factor B Subunit 1,General Tran And Dna Repair Factor Iih Subunit Tfb1,General Transcriptio Repair Factor Iih Subunit Tfb1; Chain: 1 Synonym: Tfiih Subunit Tfb1,Rna Polymerase II Transcription 73 Kda Subunit,Rna Polymerase II Transcription Factor B P73 Rna Polymerase II Transcription Factor B Subunit 1,Tfiih Su Tfb1,Rna Polymerase II Transcription Factor B 73 Kda Subuni Polymerase II Transcription Factor B P73 Subunit,Rna Polyme Transcription Factor B Subunit 1,Tfiih Subunit Tfb1,Rna Pol Transcription Factor B 73 Kda Subunit,Rna Polymerase II Tra Factor B P73 Subunit,Rna Polymerase II Transcription Factor 1,Tfiih Subunit Tfb1,Rna Polymerase II Transcription Factor Subunit,Rna Polymerase II Transcription Factor B P73 Subuni Polymerase II Transcription Factor B Subunit 1,Tfiih Subuni Polymerase II Transcription Factor B 73 Kda Subunit,Rna Pol Transcription Factor B P73 Subunit,Rna Polymerase II Transc Factor B Subunit 1,Tfiih Subunit Tfb1,Rna Polymerase II Tra Factor B 73 Kda Subunit,Rna Polymerase II Transcription Fac Subunit,Rna Polymerase II Transcription Factor B Subunit 1, Subunit Tfb1,Rna Polymerase II Transcription Factor B 73 Kd Rna Polymerase II Transcription Factor B P73 Subunit,Rna Po II Transcription Factor B Subunit 1,Tfiih Subunit Tfb1,Rna II Transcription Factor B 73 Kda Subunit,Rna Polymerase II Transcription Factor B P73 Subunit,Rna Polymerase II Transc Factor B Subunit 1,Tfiih Subunit Tfb1,Rna Polymerase II Tra Factor B 73 Kda Subunit,Rna Polymerase II Transcription Fac Subunit,Rna Polymerase II Transcription Factor B Subunit 1; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Tfb1, Ydr311w, D9740.3 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: General Transcription And Dna Repair Factor Iih S Tfb2,General Transcription And Dna Repair Factor Iih Subuni General Transcription And Dna Repair Factor Iih Subunit Tfb Transcription And Dna Repair Factor Iih Subunit Tfb2,Genera Transcription And Dna Repair Factor Iih Subunit Tfb2,Genera Transcription And Dna Repair Factor Iih Subunit Tfb2,Genera Transcription And Dna Repair Factor Iih Subunit Tfb2; Chain: 2 Synonym: Tfiih Subunit Tfb2,Rna Polymerase II Transcription 52 Kda Subunit,Rna Polymerase II Transcription Factor B P52 Rna Polymerase II Transcription Factor B Subunit 2,Tfiih Su Tfb2,Rna Polymerase II Transcription Factor B 52 Kda Subuni Polymerase II Transcription Factor B P52 Subunit,Rna Polyme Transcription Factor B Subunit 2,Tfiih Subunit Tfb2,Rna Pol Transcription Factor B 52 Kda Subunit,Rna Polymerase II Tra Factor B P52 Subunit,Rna Polymerase II Transcription Factor 2,Tfiih Subunit Tfb2,Rna Polymerase II Transcription Factor Subunit,Rna Polymerase II Transcription Factor B P52 Subuni Polymerase II Transcription Factor B Subunit 2,Tfiih Subuni Polymerase II Transcription Factor B 52 Kda Subunit,Rna Pol Transcription Factor B P52 Subunit,Rna Polymerase II Transc Factor B Subunit 2,Tfiih Subunit Tfb2,Rna Polymerase II Tra Factor B 52 Kda Subunit,Rna Polymerase II Transcription Fac Subunit,Rna Polymerase II Transcription Factor B Subunit 2, Subunit Tfb2,Rna Polymerase II Transcription Factor B 52 Kd Rna Polymerase II Transcription Factor B P52 Subunit,Rna Po II Transcription Factor B Subunit 2; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Tfb2, Ypl122c Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Rna Polymerase II Transcription Factor B Subunit Chain: 3 Synonym: Rna Polymerase II Transcription Factor B 38 Kda Su Polymerase II Transcription Factor B P38 Subunit; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Tfb3, Rig2, Ydr460w Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: General Transcription And Dna Repair Factor Iih S Tfb4,General Transcription And Dna Repair Factor Iih Subuni Polymerase II Transcription Factor B Subunit 4,General Tran And Dna Repair Factor Iih Subunit Tfb4,General Transcriptio Repair Factor Iih Subunit Tfb4; Chain: 4 Synonym: Tfiih Subunit Tfb4,Rna Polymerase II Transcription 34 Kda Subunit,Rna Polymerase II Transcription Factor B P34 Rna Polymerase II Transcription Factor B Subunit 4,Tfiih Su Tfb4,Rna Polymerase II Transcription Factor B 34 Kda Subuni Polymerase II Transcription Factor B P34 Subunit,Rna Polyme Transcription Factor B Subunit 4,Tfiih Subunit Tfb4,Rna Pol Transcription Factor B 34 Kda Subunit,Rna Polymerase II Tra Factor B P34 Subunit,Rna Polymerase II Transcription Factor 4,Tfiih Subunit Tfb4,Rna Polymerase II Transcription Factor Subunit,Rna Polymerase II Transcription Factor B P34 Subuni Polymerase II Transcription Factor B Subunit 4; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Tfb4, Ypr056w Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: General Transcription And Dna Repair Factor Iih S Tfb5; Chain: 5 Synonym: Tfiih Subunit Tfb5,Rna Polymerase II Transcription Subunit 5; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Tfb5, Ydr079c-A Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: General Transcription And Dna Repair Factor Iih S Ssl1,General Transcription And Dna Repair Factor Iih Subuni General Transcription And Dna Repair Factor Iih Subunit Ssl Transcription And Dna Repair Factor Iih Subunit Ssl1,Genera Transcription And Dna Repair Factor Iih Subunit Ssl1,Genera Transcription And Dna Repair Factor Iih Subunit Ssl1,Genera Transcription And Dna Repair Factor Iih Subunit Ssl1; Chain: 6 Synonym: Tfiih Subunit Ssl1,Rna Polymerase II Transcription Subunit Ssl1,Tfb Subunit Ssl1,Suppressor Of Stem-Loop Prote Subunit Ssl1,Rna Polymerase II Transcription Factor B Subun Tfb Subunit Ssl1,Suppressor Of Stem-Loop Protein 1,Tfiih Su Ssl1,Rna Polymerase II Transcription Factor B Subunit Ssl1, Subunit Ssl1,Suppressor Of Stem-Loop Protein 1,Tfiih Subuni Polymerase II Transcription Factor B Subunit Ssl1,Tfb Subun Suppressor Of Stem-Loop Protein 1,Tfiih Subunit Ssl1,Rna Po II Transcription Factor B Subunit Ssl1,Tfb Subunit Ssl1,Sup Stem-Loop Protein 1,Tfiih Subunit Ssl1,Rna Polymerase II Transcription Factor B Subunit Ssl1,Tfb Subunit Ssl1,Suppre Stem-Loop Protein 1,Tfiih Subunit Ssl1,Rna Polymerase II Transcription Factor B Subunit Ssl1,Tfb Subunit Ssl1,Suppre Stem-Loop Protein 1; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Ssl1, Ylr005w Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: General Transcription And Dna Repair Factor Iih H Subunit Xpb,General Transcription And Dna Repair Factor Iih Subunit Xpb,Dna Repair Helicase Rad25,General Transcription Repair Factor Iih Helicase Subunit Xpb,Dna Repair Helicase General Transcription And Dna Repair Factor Iih Helicase Su General Transcription And Dna Repair Factor Iih Helicase Su Dna Repair Helicase Rad25,General Transcription And Dna Rep Iih Helicase Subunit Xpb,Dna Repair Helicase Rad25,General Transcription And Dna Repair Factor Iih Helicase Subunit Xp Transcription And Dna Repair Factor Iih Helicase Subunit Xp Repair Helicase Rad25,General Transcription And Dna Repair Helicase Subunit Xpb,Dna Repair Helicase Rad25,General Tran And Dna Repair Factor Iih Helicase Subunit Xpb,General Tran And Dna Repair Factor Iih Helicase Subunit Xpb; Chain: 7 Synonym: Tfiih Subunit Xpb,Dna Repair Helicase Rad25,Rna Po II Transcription Factor B Subunit Ssl2,Tfb Subunit Ssl2,Sup Stem-Loop Mutation 2,Tfiih Subunit Xpb,Dna Repair Helicase Polymerase II Transcription Factor B Subunit Ssl2,Tfb Subun Suppressor Of Stem-Loop Mutation 2,Tfiih Subunit Xpb,Dna Re Helicase Rad25,Rna Polymerase II Transcription Factor B Sub Tfb Subunit Ssl2,Suppressor Of Stem-Loop Mutation 2,Tfiih S Xpb,Dna Repair Helicase Rad25,Rna Polymerase II Transcripti B Subunit Ssl2,Tfb Subunit Ssl2,Suppressor Of Stem-Loop Mut Tfiih Subunit Xpb,Dna Repair Helicase Rad25,Rna Polymerase Transcription Factor B Subunit Ssl2,Tfb Subunit Ssl2,Suppre Stem-Loop Mutation 2,Tfiih Subunit Xpb,Dna Repair Helicase Polymerase II Transcription Factor B Subunit Ssl2,Tfb Subun Suppressor Of Stem-Loop Mutation 2,Tfiih Subunit Xpb,Dna Re Helicase Rad25,Rna Polymerase II Transcription Factor B Sub Tfb Subunit Ssl2,Suppressor Of Stem-Loop Mutation 2,Tfiih S Xpb,Dna Repair Helicase Rad25,Rna Polymerase II Transcripti B Subunit Ssl2,Tfb Subunit Ssl2,Suppressor Of Stem-Loop Mut Tfiih Subunit Xpb,Dna Repair Helicase Rad25,Rna Polymerase Transcription Factor B Subunit Ssl2,Tfb Subunit Ssl2,Suppre Stem-Loop Mutation 2,Tfiih Subunit Xpb,Dna Repair Helicase Polymerase II Transcription Factor B Subunit Ssl2,Tfb Subun Suppressor Of Stem-Loop Mutation 2,Tfiih Subunit Xpb,Dna Re Helicase Rad25,Rna Polymerase II Transcription Factor B Sub Tfb Subunit Ssl2,Suppressor Of Stem-Loop Mutation 2; Ec: 3.6.4.12,3.6.4.12,3.6.4.12,3.6.4.12,3.6.4.12,3.6.4.12,3 3.6.4.12,3.6.4.12,3.6.4.12,3.6.4.12; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Ssl2, Lom3, Rad25, Uvs112, Yil143c Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb1 Chain: A Synonym: Rna Polymerase II Subunit B1,Dna-Directed Rna Poly Largest Subunit,Rna Polymerase II Subunit B220; Ec: 2.7.7.6		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb2 Chain: B Synonym: Rna Polymerase II Subunit 2,B150,Dna-Directed Rna II 140 Kda Polypeptide; Ec: 2.7.7.6		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb3 Chain: C Synonym: Rna Polymerase II Subunit B3,B44.5,Dna-Directed Rn Polymerase II 45 Kda Polypeptide;		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb4 Chain: D Synonym: Rna Polymerase II Subunit B4,B32,Dna-Directed Rna II 32 Kda Polypeptide;		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: E Synonym: Rna Polymerases I,II,And III Subunit Abc1,Abc27,Dn Rna Polymerases I,And III 27 Kda Polypeptide;		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: F Synonym: Rna Polymerases I,II,And III Subunit Abc2,Abc23,Dn Rna Polymerases I,And III 23 Kda Polypeptide; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Rpo26, Rpb6, Ypr187w, P9677.8 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb7 Chain: G Synonym: Rna Polymerase II Subunit B7,B16		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: H Synonym: Rna Polymerases I,II,And III Subunit Abc3,Abc14.4, Dna-Directed Rna Polymerases I,And III 14.5 Kda Polypeptide		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb9 Chain: I Synonym: Rna Polymerase II Subunit B9,B12.6,Dna-Directed Rn Polymerase II 14.2 Kda Polypeptide,Dna-Directed Rna Polymer Subunit 9;		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: J Synonym: Rna Polymerases I,II,And III Subunit Abc5,Abc10-Be Dna-Directed Rna Polymerases I,And III 8.3 Kda Polypeptide;		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292
Molecule: Dna-Directed Rna Polymerase II Subunit Rpb11 Chain: K Synonym: Rna Polymerase II Subunit B11,B13.6,Dna-Directed R Polymerase II 13.6 Kda Polypeptide;		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292
Molecule: Dna-Directed Rna Polymerases I, II, And III Subun Chain: L Synonym: Rna Polymerases I,II,And III Subunit Abc4,Abc10-Al		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292
Molecule: Transcription Initiation Factor Iib Chain: M Synonym: General Transcription Factor Tfiib,Transcription F Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Sua7, Ypr086w, P9513.4 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Tata-Box-Binding Protein Chain: O Synonym: Tata Sequence-Binding Protein,Tbp,Tata-Binding Fac Box Factor,Transcription Factor D,Transcription Initiation Tfiid Tbp Subunit; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Spt15, Btf1, Tbp1, Yer148w Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Transcription Initiation Factor Iif Subunit Alpha Chain: Q Synonym: Tfiif-Alpha,Tfiif Large Subunit,Transcription Fact Kda Subunit,P105; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Tfg1, Ssu71, Ygr186w, G7526 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Transcription Initiation Factor Iif Subunit Beta Chain: R Synonym: Atp-Dependent Helicase Tfg2,Tfiif Medium Subunit,T Transcription Factor G 54 Kda Subunit; Ec: 3.6.4.12 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Tfg2, Ygr005c Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Transcription Initiation Factor Iia Large Subunit Transcription Initiation Factor Iia Large Subunit; Chain: U Synonym: Tfiia Large Subunit,Tfiia 32 Kda Subunit,Tfiia Lar Subunit,Tfiia 32 Kda Subunit; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Toa1, Yor194c Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Transcription Initiation Factor Iia Subunit 2 Chain: V Synonym: General Transcription Factor Iia Subunit 2,Tfiia 1 Subunit,Transcription Initiation Factor Iia Small Chain,Tra Initiation Factor Iia Small Subunit; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Toa2, Ykl058w Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Transcription Initiation Factor Iie Subunit Alpha Transcription Initiation Factor Iie Subunit Alpha,Transcrip Initiation Factor Iie Subunit Alpha,Transcription Initiatio Iie Subunit Alpha,Transcription Initiation Factor Iie Subun Chain: W Synonym: Tfiie-Alpha,Factor A 66 Kda Subunit,Transcription Large Subunit,Tfiie-Alpha,Factor A 66 Kda Subunit,Transcrip Factor A Large Subunit,Tfiie-Alpha,Factor A 66 Kda Subunit, Transcription Factor A Large Subunit,Tfiie-Alpha,Factor A 6 Subunit,Transcription Factor A Large Subunit; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Tfa1, Ykl028w Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Transcription Initiation Factor Iie Subunit Beta Chain: X Synonym: Tfiie-Beta,Factor A 43 Kda Subunit,Transcription F Small Subunit; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Tfa2, Ykr062w Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Unknown Protein Chain: Z Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_taxid: 559292 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Non-Template Dna (His4) Chain: N Engineered: Yes		Synthetic: Yes Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_taxid: 559292
Molecule: Template Dna (His4) Chain: T Engineered: Yes		Synthetic: Yes Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_taxid: 559292
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	6.70 Å
ligand	MG, SF4, ZN	enzyme	Hydrolase E.C.3.6.4.12 BRENDA
Gene Ontology	Chain Function Process Component 0 1 2 ATPase activator activity 3 holo TFIIH complex 4 holo TFIIH complex 5 holo TFIIH complex 6 ubiquitin protein ligase act... 7 A RNA-directed 5'-3' RNA polym... B RNA-directed 5'-3' RNA polym... C RNA-directed 5'-3' RNA polym... D RNA-directed 5'-3' RNA polym... E RNA-directed 5'-3' RNA polym... F RNA-directed 5'-3' RNA polym... G RNA-directed 5'-3' RNA polym... H RNA-directed 5'-3' RNA polym... I RNA-directed 5'-3' RNA polym... J RNA-directed 5'-3' RNA polym... DNA-directed RNA polymerase ... K RNA-directed 5'-3' RNA polym... L RNA-directed 5'-3' RNA polym... M O Q transcription factor TFIIF c... R transcription factor TFIIF c... U V W X
Primary reference	Promoter Distortion and Opening in the RNA Polymerase II Cleft., Dienemann C, Schwalb B, Schilbach S, Cramer P, Mol Cell. 2018 Nov 16. pii: S1097-2765(18)30846-3. doi:, 10.1016/j.molcel.2018.10.014. PMID:30472190

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1120 Kb) [Save to disk] Biological Unit Coordinates (6gym.pdb1.gz) 1088 Kb LPC: Ligand-Protein Contacts for 6GYM CSU: Contacts of Structural Units for 6GYM Retrieve 6GYM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6GYM from S2C, [Save to disk]

View 6GYM in 3D

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6gym_6] [6gym_C] [6gym_7] [6gym_V] [6gym_1] [6gym_2] [6gym_W] [6gym_O] [6gym_U] [6gym_I] [6gym_N] [6gym_Z] [6gym_J] [6gym_R] [6gym_D] [6gym_E] [6gym_A] [6gym_0] [6gym_Q] [6gym_3] [6gym_5] [6gym_M] [6gym_L] [6gym_4] [6gym_K] [6gym_B] [6gym_T] [6gym_F] [6gym_H] [6gym_X] [6gym_G] SWISS-PROT database: Domain organization of by SWISSPFAM

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